Annotations: 1YRZ

Crystal structure of xylan beta-1,4-xylosidase from Bacillus Halodurans C-125

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1yrza1	All beta proteins	Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	Beta-D-xylosidase C-terminal domain-like	Beta-D-xylosidase C-terminal domain	(Halalkalibacterium halodurans C-125 ) [TaxId: 272558 ],	SCOPe (2.08)
A	d1yrza2	All beta proteins	5-bladed beta-propeller	Arabinanase/levansucrase/invertase	alpha-L-arabinanase-like	Beta-D-xylosidase N-terminal domain	(Halalkalibacterium halodurans C-125 ) [TaxId: 272558 ],	SCOPe (2.08)
B	d1yrzb1	All beta proteins	Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	Beta-D-xylosidase C-terminal domain-like	Beta-D-xylosidase C-terminal domain	(Halalkalibacterium halodurans C-125 ) [TaxId: 272558 ],	SCOPe (2.08)
B	d1yrzb2	All beta proteins	5-bladed beta-propeller	Arabinanase/levansucrase/invertase	alpha-L-arabinanase-like	Beta-D-xylosidase N-terminal domain	(Halalkalibacterium halodurans C-125 ) [TaxId: 272558 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	beta-D-xylosidase C-terminal domain-like	8022523	4001673	SCOP2 (2022-06-29)
A	SCOP2 Family	alpha-L-arabinanase-like	8022524	4002120	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Concanavalin A-like lectins/glucanases	8034903	3000120	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Furanosidase-like	8034904	3000845	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Furanosidase-like	8034904	3000845	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8034903	3000120	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	GH43_C2	e1yrzA1	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Concanavalin A-like lectins/glucanases	F: GH43_C2	ECOD (v295.2)
A	Ldl_recept_b	e1yrzA2	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: Phage tail fiber protein trimerization domain	T: Phage tail fiber protein trimerization domain	F: Ldl_recept_b	ECOD (v295.2)
B	Rhv	e1yrzB1	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: Phage tail fiber protein trimerization domain	T: Phage tail fiber protein trimerization domain	F: Rhv	ECOD (v295.2)
B	Ldl_recept_b	e1yrzB2	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: Phage tail fiber protein trimerization domain	T: Phage tail fiber protein trimerization domain	F: Ldl_recept_b	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.115.10.20	Mainly Beta	5 Propeller	Tachylectin-2	Chain A	CATH (4.3.0)
A	2.60.120.200	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
B	2.115.10.20	Mainly Beta	5 Propeller	Tachylectin-2	Chain A	CATH (4.3.0)
B	2.60.120.200	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF04616	Glycosyl hydrolases family 43 (Glyco_hydro_43)	Glycosyl hydrolases family 43	-	Repeat
A, B	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain (GH43_C2)	Beta xylosidase C-terminal Concanavalin A-like domain	This domain is found to the C-terminus of the Pfam:PF04616 domain in a group of bacterial and fungal beta-xylosidases, including the members from Bacillus pumilus [1] and Cellulosimicrobium cellulans [2]. This domain adopts a concanavalin A-like fold ...	This domain is found to the C-terminus of the Pfam:PF04616 domain in a group of bacterial and fungal beta-xylosidases, including the members from Bacillus pumilus [1] and Cellulosimicrobium cellulans [2]. This domain adopts a concanavalin A-like fold.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	xylan beta-1,4-xylosidase	xylanase activity hydrolase activity, acting on glycosyl bonds xylan 1,4-beta-xylosidase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity	carbohydrate metabolic process primary metabolic process metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	Homologous Superfamily
A, B	IPR023296	Glycosyl hydrolase, five-bladed beta-propeller domain superfamily	Homologous Superfamily
A, B	IPR006710	Glycoside hydrolase, family 43	Family
A, B	IPR041542	Beta-xylosidase, C-terminal Concanavalin A-like domain	Domain
A, B	IPR051795	Glycosyl Hydrolase Family 43	Family