1ZBP

X-Ray Crystal Structure of Protein VPA1032 from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR44

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1zbpa1	Multi-domain proteins (alpha and beta)	ImpE-like	ImpE-like	ImpE-like	Hypothetical protein VPA1032	(Vibrio parahaemolyticus RIMD 2210633 ) [TaxId: 223926 ],	SCOPe (2.08)
A	d1zbpa2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Vibrio parahaemolyticus RIMD 2210633 ) [TaxId: 223926 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	ImpE-like	8023153	4000449	SCOP2 (2022-06-29)
A	SCOP2 Family	VPA1032 N-terminal domain-like	8054265	4007635	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	ImpE-like	8035533	3000326	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	TPR-like	8054266	3001345	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ImpE	e1zbpA1	A: beta barrels	X: SH3	H: ImpE-like (From Topology)	T: ImpE-like	F: ImpE	ECOD (1.6)
A	ImpE_1	e1zbpA2	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: ImpE_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.25.40.10	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Tetratricopeptide repeat domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF07024	ImpE protein (ImpE)	ImpE protein	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
A	IPR009211	Type VI secretion system accessory component TagJ	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.