1ZN1
Coordinates of RRF fitted into Cryo-EM map of the 70S post-termination complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | d1zn1a1 | Alpha and beta proteins (a+b) | RRF/tRNA synthetase additional domain-like | Ribosome recycling factor, RRF | Ribosome recycling factor, RRF | Ribosome recycling factor, RRF | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | Ribosome recycling factor, RRF | 8032742 | 3001524 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | RRF | e1zn1A1 | A: a+b two layers | X: RRF/tRNA synthetase additional domain-like | H: Ribosome recycling factor, RRF (From Topology) | T: Ribosome recycling factor, RRF | F: RRF | ECOD (1.6) |
D [auth L] | Ribosom_S12_S23 | e1zn1L1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosom_S12_S23 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A] | PF01765 | Ribosome recycling factor (RRF) | Ribosome recycling factor | The ribosome recycling factor (RRF / ribosome release factor) dissociates the ribosome from the mRNA after termination of translation, and is essential bacterial growth [1]. Thus ribosomes are "recycled" and ready for another round of protein synthe ... | Domain |
D [auth L] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A] | IPR023584 | Ribosome recycling factor domain | Domain |
C [auth A] | IPR036191 | RRF superfamily | Homologous Superfamily |
C [auth A] | IPR002661 | Ribosome recycling factor | Family |
D [auth L] | IPR005679 | Ribosomal protein uS12, bacterial-type | Family |
D [auth L] | IPR006032 | Small ribosomal subunit protein uS12 | Family |
D [auth L] | IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |