1ZVP

Crystal Structure of a Protein of Unknown Function VC0802 from Vibrio cholerae, Possible Transport Protein

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1zvpa1	Alpha and beta proteins (a+b)	Ferredoxin-like	ACT-like	VC0802-like	Hypothetical protein VC0802	(Vibrio cholerae ) [TaxId: 666 ],	SCOPe (2.08)
B	d1zvpb1	Alpha and beta proteins (a+b)	Ferredoxin-like	ACT-like	VC0802-like	Hypothetical protein VC0802	(Vibrio cholerae ) [TaxId: 666 ],	SCOPe (2.08)
C	d1zvpc1	Alpha and beta proteins (a+b)	Ferredoxin-like	ACT-like	VC0802-like	Hypothetical protein VC0802	(Vibrio cholerae ) [TaxId: 666 ],	SCOPe (2.08)
C	d1zvpc3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Vibrio cholerae ) [TaxId: 666 ],	SCOPe (2.08)
D	d1zvpd1	Alpha and beta proteins (a+b)	Ferredoxin-like	ACT-like	VC0802-like	Hypothetical protein VC0802	(Vibrio cholerae ) [TaxId: 666 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	ACT-like	8003892	3000006	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	ACT-like	8003892	3000006	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	ACT-like	8003892	3000006	SCOP2B (2022-06-29)
D	SCOP2 Family	VC0802-like	8003891	4000273	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	ACT-like	8003892	3000006	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ACT_3	e1zvpA1	A: a+b two layers	X: Alpha-beta plaits	H: ACT-like (From Topology)	T: ACT-like	F: ACT_3	ECOD (1.6)
A	ACT_7	e1zvpA2	A: a+b two layers	X: Alpha-beta plaits	H: ACT-like (From Topology)	T: ACT-like	F: ACT_7	ECOD (1.6)
B	ACT_3	e1zvpB1	A: a+b two layers	X: Alpha-beta plaits	H: ACT-like (From Topology)	T: ACT-like	F: ACT_3	ECOD (1.6)
B	ACT_7	e1zvpB2	A: a+b two layers	X: Alpha-beta plaits	H: ACT-like (From Topology)	T: ACT-like	F: ACT_7	ECOD (1.6)
C	ACT_3	e1zvpC1	A: a+b two layers	X: Alpha-beta plaits	H: ACT-like (From Topology)	T: ACT-like	F: ACT_3	ECOD (1.6)
C	ACT_7	e1zvpC2	A: a+b two layers	X: Alpha-beta plaits	H: ACT-like (From Topology)	T: ACT-like	F: ACT_7	ECOD (1.6)
D	ACT_3	e1zvpD1	A: a+b two layers	X: Alpha-beta plaits	H: ACT-like (From Topology)	T: ACT-like	F: ACT_3	ECOD (1.6)
D	ACT_7	e1zvpD2	A: a+b two layers	X: Alpha-beta plaits	H: ACT-like (From Topology)	T: ACT-like	F: ACT_7	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.2130.10	Alpha Beta	2-Layer Sandwich	VC0802-like	VC0802-like	CATH (4.3.0)
B	3.30.2130.10	Alpha Beta	2-Layer Sandwich	VC0802-like	VC0802-like	CATH (4.3.0)
C	3.30.2130.10	Alpha Beta	2-Layer Sandwich	VC0802-like	VC0802-like	CATH (4.3.0)
D	3.30.2130.10	Alpha Beta	2-Layer Sandwich	VC0802-like	VC0802-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF10000	ACT domain (ACT_3)	ACT domain	This domain, found in various hypothetical bacterial proteins, has no known function. However, its structure is similar to the ACT domain which suggests that it binds to amino acids and regulates other protein activity. This family was formerly known ...	This domain, found in various hypothetical bacterial proteins, has no known function. However, its structure is similar to the ACT domain which suggests that it binds to amino acids and regulates other protein activity. This family was formerly known as DUF2241.	Domain
A, B, C, D	PF13840	ACT domain (ACT_7)	ACT domain	The ACT domain is a structural motif of 70-90 amino acids that functions in the control of metabolism, solute transport and signal transduction. They are thus found in a variety of different proteins in a variety of different arrangements [1]. In mam ...	The ACT domain is a structural motif of 70-90 amino acids that functions in the control of metabolism, solute transport and signal transduction. They are thus found in a variety of different proteins in a variety of different arrangements [1]. In mammalian phenylalanine hydroxylase the domain forms no contacts but promotes an allosteric effect despite the apparent lack of ligand binding [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	hypothetical protein VC0802	amino acid kinase activity kinase activity aspartate kinase activity phosphotransferase activity, carboxyl group as acceptor transferase activity catalytic activity transferase activity, transferring phosphorus-containing groups	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR027795	CASTOR, ACT domain	Domain
A, B, C, D	IPR018717	Domain of unknown function DUF2241	Domain
A, B, C, D	IPR045865	ACT-like domain	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.