Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2axta1 Membrane and cell surface proteins and peptides Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Photosystem Q(B) protein 1, PsbA1 (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
J [auth K]d2axtk1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II reaction center protein K, PsbK PsbK-like Photosystem II reaction center protein K, PsbK (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
K [auth L]d2axtl1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II reaction center protein L, PsbL PsbL-like Photosystem II reaction center protein L, PsbL (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
L [auth M]d2axtm1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II reaction center protein M, PsbM PsbM-like Photosystem II reaction center protein M, PsbM (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
M [auth O]d2axto1 Membrane and cell surface proteins and peptides Transmembrane beta-barrels OMPA-like PsbO-like Manganese-stabilising protein, PsbO (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
N [auth T]d2axtt1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II reaction center protein T, PsbT PsbT-like Photosystem II reaction center protein T, PsbT (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
O [auth U]d2axtu1 All alpha proteins SAM domain-like PsbU/PolX domain-like PsbU-like Photosystem II 12 kDa extrinsic protein PsbU (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
P [auth V]d2axtv_ All alpha proteins Cytochrome c Cytochrome c monodomain cytochrome c automated matches (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
R [auth Z]d2axtz1 Membrane and cell surface proteins and peptides Transmembrane helix hairpin PsbZ-like PsbZ-like Photosystem II reaction center protein Z, PsbZ (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
Bd2axtb1 Membrane and cell surface proteins and peptides Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II core light harvesting protein PsbB (Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ], SCOPe (2.08)
Cd2axtc1 Membrane and cell surface proteins and peptides Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II CP43 protein PsbC (Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ], SCOPe (2.08)
Dd2axtd1 Membrane and cell surface proteins and peptides Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Photosystem II reaction center d2 protein PsbD2 (Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ], SCOPe (2.08)
Ed2axte1 Membrane and cell surface proteins and peptides Single transmembrane helix Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunit alpha, PsbE (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
Fd2axtf1 Membrane and cell surface proteins and peptides Single transmembrane helix Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunit beta, PsbF (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
G [auth H]d2axth1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II 10 kDa phosphoprotein PsbH PsbH-like Photosystem II reaction center protein H, PsbH (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
H [auth I]d2axti1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II reaction center protein I, PsbI PsbI-like Photosystem II reaction center protein I, PsbI (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
I [auth J]d2axtj1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II reaction center protein J, PsbJ PsbJ-like Photosystem II reaction center protein J, PsbJ (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyBacterial photosystem II reaction centre, L and M subunits 8020361 4002035 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8032741 3000736 SCOP2 (2022-06-29)
S [auth a]SCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8032741 3000736 SCOP2B (2022-06-29)
BA [auth k]SCOP2B SuperfamilyPhotosystem II reaction center protein K, PsbK 8032757 3001585 SCOP2B (2022-06-29)
J [auth K]SCOP2 FamilyPsbK-like 8020377 4002673 SCOP2 (2022-06-29)
J [auth K]SCOP2 SuperfamilyPhotosystem II reaction center protein K, PsbK 8032757 3001585 SCOP2 (2022-06-29)
CA [auth l]SCOP2B SuperfamilyPhotosystem II reaction center protein L, PsbL 8032759 3001523 SCOP2B (2022-06-29)
K [auth L]SCOP2 FamilyPsbL-like 8020379 4002634 SCOP2 (2022-06-29)
K [auth L]SCOP2 SuperfamilyPhotosystem II reaction center protein L, PsbL 8032759 3001523 SCOP2 (2022-06-29)
DA [auth m]SCOP2B SuperfamilyPhotosystem II reaction center protein M, PsbM 8032762 3001573 SCOP2B (2022-06-29)
L [auth M]SCOP2 FamilyPsbM-like 8020382 4002664 SCOP2 (2022-06-29)
L [auth M]SCOP2 SuperfamilyPhotosystem II reaction center protein M, PsbM 8032762 3001573 SCOP2 (2022-06-29)
EA [auth o]SCOP2B SuperfamilyOMPA barrel-like 8032765 3000208 SCOP2B (2022-06-29)
M [auth O]SCOP2 FamilyPsbO-like 8020385 4002770 SCOP2 (2022-06-29)
M [auth O]SCOP2 SuperfamilyOMPA barrel-like 8032765 3000208 SCOP2 (2022-06-29)
FA [auth t]SCOP2B SuperfamilyPhotosystem II reaction center protein T, PsbT 8032769 3001561 SCOP2B (2022-06-29)
N [auth T]SCOP2 FamilyPsbT-like 8020389 4002656 SCOP2 (2022-06-29)
N [auth T]SCOP2 SuperfamilyPhotosystem II reaction center protein T, PsbT 8032769 3001561 SCOP2 (2022-06-29)
GA [auth u]SCOP2B SuperfamilyPsbU/PolX domain-like 8032768 3000893 SCOP2B (2022-06-29)
O [auth U]SCOP2 FamilyPsbU-like 8020388 4001403 SCOP2 (2022-06-29)
O [auth U]SCOP2 SuperfamilyPsbU/PolX domain-like 8032768 3000893 SCOP2 (2022-06-29)
HA [auth v]SCOP2B SuperfamilyCytochrome c 8036565 3000815 SCOP2B (2022-06-29)
P [auth V]SCOP2B SuperfamilyCytochrome c 8036565 3000815 SCOP2B (2022-06-29)
JA [auth z]SCOP2B SuperfamilyPsbZ-like 8032770 3001624 SCOP2B (2022-06-29)
R [auth Z]SCOP2 FamilyPsbZ-like 8020390 4002701 SCOP2 (2022-06-29)
R [auth Z]SCOP2 SuperfamilyPsbZ-like 8032770 3001624 SCOP2 (2022-06-29)
BSCOP2 FamilyPhotosystem II antenna protein-like 8020363 4002735 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyPhotosystem II antenna protein-like 8032743 3001674 SCOP2 (2022-06-29)
T [auth b]SCOP2B SuperfamilyPhotosystem II antenna protein-like 8032743 3001674 SCOP2B (2022-06-29)
CSCOP2 FamilyPhotosystem II antenna protein-like 8020366 4002735 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyPhotosystem II antenna protein-like 8032746 3001674 SCOP2 (2022-06-29)
U [auth c]SCOP2B SuperfamilyPhotosystem II antenna protein-like 8032746 3001674 SCOP2B (2022-06-29)
DSCOP2 FamilyBacterial photosystem II reaction centre, L and M subunits 8020370 4002035 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8032750 3000736 SCOP2 (2022-06-29)
V [auth d]SCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8032750 3000736 SCOP2B (2022-06-29)
ESCOP2 FamilyCytochrome b559 subunits 8020369 4002681 SCOP2 (2022-06-29)
ESCOP2 SuperfamilyCytochrome b559 subunits 8032749 3001602 SCOP2 (2022-06-29)
W [auth e]SCOP2B SuperfamilyCytochrome b559 subunits 8032749 3001602 SCOP2B (2022-06-29)
FSCOP2 FamilyCytochrome b559 subunits 8020372 4002681 SCOP2 (2022-06-29)
FSCOP2 SuperfamilyCytochrome b559 subunits 8032752 3001602 SCOP2 (2022-06-29)
X [auth f]SCOP2B SuperfamilyCytochrome b559 subunits 8032752 3001602 SCOP2B (2022-06-29)
G [auth H]SCOP2 FamilyPsbH-like 8020373 4002649 SCOP2 (2022-06-29)
G [auth H]SCOP2 SuperfamilyPhotosystem II 10 kDa phosphoprotein PsbH 8032753 3001547 SCOP2 (2022-06-29)
Y [auth h]SCOP2B SuperfamilyPhotosystem II 10 kDa phosphoprotein PsbH 8032753 3001547 SCOP2B (2022-06-29)
H [auth I]SCOP2 FamilyPsbI-like 8020374 4002676 SCOP2 (2022-06-29)
H [auth I]SCOP2 SuperfamilyPhotosystem II reaction center protein I, PsbI 8032754 3001590 SCOP2 (2022-06-29)
Z [auth i]SCOP2B SuperfamilyPhotosystem II reaction center protein I, PsbI 8032754 3001590 SCOP2B (2022-06-29)
AA [auth j]SCOP2B SuperfamilyPhotosystem II reaction center protein J, PsbJ 8032755 3001534 SCOP2B (2022-06-29)
I [auth J]SCOP2 FamilyPsbJ-like 8020375 4002642 SCOP2 (2022-06-29)
I [auth J]SCOP2 SuperfamilyPhotosystem II reaction center protein J, PsbJ 8032755 3001534 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APhoto_RCe2axtA1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
S [auth a]Photo_RCe2axta1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
BA [auth k]PsbKe2axtk1 A: extended segmentsX: Photosystem II reaction center protein K, PsbK (From Topology)H: Photosystem II reaction center protein K, PsbK (From Topology)T: Photosystem II reaction center protein K, PsbKF: PsbKECOD (1.6)
J [auth K]PsbKe2axtK1 A: extended segmentsX: Photosystem II reaction center protein K, PsbK (From Topology)H: Photosystem II reaction center protein K, PsbK (From Topology)T: Photosystem II reaction center protein K, PsbKF: PsbKECOD (1.6)
CA [auth l]PsbLe2axtl1 A: extended segmentsX: Photosystem II reaction center protein L, PsbL (From Topology)H: Photosystem II reaction center protein L, PsbL (From Topology)T: Photosystem II reaction center protein L, PsbLF: PsbLECOD (1.6)
K [auth L]PsbLe2axtL1 A: extended segmentsX: Photosystem II reaction center protein L, PsbL (From Topology)H: Photosystem II reaction center protein L, PsbL (From Topology)T: Photosystem II reaction center protein L, PsbLF: PsbLECOD (1.6)
DA [auth m]PsbMe2axtm1 A: extended segmentsX: Photosystem II reaction center protein M, PsbM (From Topology)H: Photosystem II reaction center protein M, PsbM (From Topology)T: Photosystem II reaction center protein M, PsbMF: PsbMECOD (1.6)
L [auth M]PsbMe2axtM1 A: extended segmentsX: Photosystem II reaction center protein M, PsbM (From Topology)H: Photosystem II reaction center protein M, PsbM (From Topology)T: Photosystem II reaction center protein M, PsbMF: PsbMECOD (1.6)
EA [auth o]MSPe2axto1 A: beta barrelsX: Outer membrane meander beta-barrelsH: OMPA-like (From Topology)T: OMPA-likeF: MSPECOD (1.6)
M [auth O]MSPe2axtO1 A: beta barrelsX: Outer membrane meander beta-barrelsH: OMPA-like (From Topology)T: OMPA-likeF: MSPECOD (1.6)
FA [auth t]PsbTe2axtt1 A: extended segmentsX: Photosystem II reaction center protein T, PsbT (From Topology)H: Photosystem II reaction center protein T, PsbT (From Topology)T: Photosystem II reaction center protein T, PsbTF: PsbTECOD (1.6)
N [auth T]PsbTe2axtT1 A: extended segmentsX: Photosystem II reaction center protein T, PsbT (From Topology)H: Photosystem II reaction center protein T, PsbT (From Topology)T: Photosystem II reaction center protein T, PsbTF: PsbTECOD (1.6)
GA [auth u]PsbUe2axtu1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: PsbUECOD (1.6)
O [auth U]PsbUe2axtU1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: PsbUECOD (1.6)
HA [auth v]Cytochrom_C550e2axtv1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C550ECOD (1.6)
P [auth V]Cytochrom_C550e2axtV1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C550ECOD (1.6)
JA [auth z]Ycf9e2axtz1 A: extended segmentsX: PsbZ-like (From Topology)H: PsbZ-like (From Topology)T: PsbZ-likeF: Ycf9ECOD (1.6)
R [auth Z]Ycf9e2axtZ1 A: extended segmentsX: PsbZ-like (From Topology)H: PsbZ-like (From Topology)T: PsbZ-likeF: Ycf9ECOD (1.6)
BPSII_1ste2axtB2 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PSII_1stECOD (1.6)
BPSII_2nde2axtB3 A: a+b two layersX: Photosystem II antenna protein PsbB insertion domain (From Topology)H: Photosystem II antenna protein PsbB insertion domain (From Topology)T: Photosystem II antenna protein PsbB insertion domainF: PSII_2ndECOD (1.6)
T [auth b]PSII_1ste2axtb1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PSII_1stECOD (1.6)
T [auth b]PSII_2nde2axtb2 A: a+b two layersX: Photosystem II antenna protein PsbB insertion domain (From Topology)H: Photosystem II antenna protein PsbB insertion domain (From Topology)T: Photosystem II antenna protein PsbB insertion domainF: PSII_2ndECOD (1.6)
CPSII_1ste2axtC1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PSII_1stECOD (1.6)
U [auth c]PSII_1ste2axtc1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PSII_1stECOD (1.6)
DPhoto_RCe2axtD1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
V [auth d]Photo_RCe2axtd1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
ECytochrom_B559ae2axtE1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: Cytochrom_B559aECOD (1.6)
W [auth e]Cytochrom_B559ae2axte1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: Cytochrom_B559aECOD (1.6)
FCytochrom_B559e2axtF1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: Cytochrom_B559ECOD (1.6)
X [auth f]Cytochrom_B559e2axtf1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: Cytochrom_B559ECOD (1.6)
G [auth H]PsbHe2axtH1 A: extended segmentsX: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)H: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)T: Photosystem II 10 kDa phosphoprotein PsbHF: PsbHECOD (1.6)
Y [auth h]PsbHe2axth1 A: extended segmentsX: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)H: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)T: Photosystem II 10 kDa phosphoprotein PsbHF: PsbHECOD (1.6)
H [auth I]PsbIe2axtI1 A: extended segmentsX: Photosystem II reaction center protein I, PsbI (From Topology)H: Photosystem II reaction center protein I, PsbI (From Topology)T: Photosystem II reaction center protein I, PsbIF: PsbIECOD (1.6)
Z [auth i]PsbIe2axti1 A: extended segmentsX: Photosystem II reaction center protein I, PsbI (From Topology)H: Photosystem II reaction center protein I, PsbI (From Topology)T: Photosystem II reaction center protein I, PsbIF: PsbIECOD (1.6)
AA [auth j]PsbJe2axtj1 A: extended segmentsX: Photosystem II reaction center protein J, PsbJ (From Topology)H: Photosystem II reaction center protein J, PsbJ (From Topology)T: Photosystem II reaction center protein J, PsbJF: PsbJECOD (1.6)
I [auth J]PsbJe2axtJ1 A: extended segmentsX: Photosystem II reaction center protein J, PsbJ (From Topology)H: Photosystem II reaction center protein J, PsbJ (From Topology)T: Photosystem II reaction center protein J, PsbJF: PsbJECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
EA [auth o]2.40.160.30 Mainly Beta Beta Barrel Porin Photosystem II, cytochrome c-550 precursorCATH (4.3.0)
EA [auth o]3.30.2050.10 Alpha Beta 2-Layer Sandwich photosynthetic oxygen evolving center fold photosynthetic oxygen evolving center domainCATH (4.3.0)
M [auth O]2.40.160.30 Mainly Beta Beta Barrel Porin Photosystem II, cytochrome c-550 precursorCATH (4.3.0)
M [auth O]3.30.2050.10 Alpha Beta 2-Layer Sandwich photosynthetic oxygen evolving center fold photosynthetic oxygen evolving center domainCATH (4.3.0)
GA [auth u]1.10.150.320 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
O [auth U]1.10.150.320 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
HA [auth v]1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
P [auth V]1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
JA [auth z]1.10.287.740 Mainly Alpha Orthogonal Bundle Helix Hairpins Photosystem II PsbZ, reaction centreCATH (4.3.0)
R [auth Z]1.10.287.740 Mainly Alpha Orthogonal Bundle Helix Hairpins Photosystem II PsbZ, reaction centreCATH (4.3.0)
B3.10.680.10 Alpha Beta Roll Photosystem II CP47 reaction center protein Photosystem II CP47 reaction center proteinCATH (4.3.0)
T [auth b]3.10.680.10 Alpha Beta Roll Photosystem II CP47 reaction center protein Photosystem II CP47 reaction center proteinCATH (4.3.0)
C1.10.10.670 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A photosystem ii from thermosynechococcus elongatusCATH (4.3.0)
U [auth c]1.10.10.670 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A photosystem ii from thermosynechococcus elongatusCATH (4.3.0)
E1.20.5.860 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II cytochrome b559, alpha subunitCATH (4.3.0)
W [auth e]1.20.5.860 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II cytochrome b559, alpha subunitCATH (4.3.0)
G [auth H]1.20.5.880 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II reaction center protein HCATH (4.3.0)
Y [auth h]1.20.5.880 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II reaction center protein HCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
S [auth a]
PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
BA [auth k],
J [auth K]
PF02533Photosystem II 4 kDa reaction centre component (PsbK)Photosystem II 4 kDa reaction centre component- Family
CA [auth l],
K [auth L]
PF02419PsbL protein (PsbL)PsbL protein- Family
DA [auth m],
L [auth M]
PF05151Photosystem II reaction centre M protein (PsbM) (PsbM)Photosystem II reaction centre M protein (PsbM)- Family
FA [auth t],
N [auth T]
PF01405Photosystem II reaction centre T protein (PsbT)Photosystem II reaction centre T protein- Family
GA [auth u],
O [auth U]
PF06514Photosystem II 12 kDa extrinsic protein (PsbU) (PsbU)Photosystem II 12 kDa extrinsic protein (PsbU)- Family
HA [auth v],
P [auth V]
PF14495Cytochrome c-550 domain (Cytochrom_C550)Cytochrome c-550 domainThis domain is a heme binding cytochrome known as cytochrome c550, or cytochrome c549, or PsbV [1].Domain
JA [auth z],
R [auth Z]
PF01737YCF9 (Ycf9)YCF9- Family
C,
U [auth c]
PF00421Photosystem II protein (PSII)Photosystem II protein- Family
D,
V [auth d]
PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
E,
W [auth e]
PF00283Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits- Family
E,
W [auth e]
PF00284Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit (Cytochrom_B559a)Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit- Family
G [auth H],
Y [auth h]
PF00737Photosystem II 10 kDa phosphoprotein (PsbH)Photosystem II 10 kDa phosphoprotein- Family
H [auth I],
Z [auth i]
PF02532Photosystem II reaction centre I protein (PSII 4.8 kDa protein) (PsbI)Photosystem II reaction centre I protein (PSII 4.8 kDa protein)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
S [auth a]
Photosystem Q(B) protein
BA [auth k],
J [auth K]
Photosystem II reaction center protein K-
CA [auth l],
K [auth L]
Photosystem II reaction center L protein-
DA [auth m],
L [auth M]
Photosystem II reaction center M protein-
EA [auth o],
M [auth O]
Photosystem II manganese-stabilizing polypeptide
FA [auth t],
N [auth T]
Photosystem II reaction center T protein-
GA [auth u],
O [auth U]
Photosystem II 12 kDa extrinsic protein-
HA [auth v],
P [auth V]
Cytochrome c-550
IA [auth x],
Q [auth X]
Unassigned subunits---
JA [auth z],
R [auth Z]
Photosystem II reaction center Z protein-
B,
T [auth b]
CP47 protein
C,
U [auth c]
photosystem II CP43 protein
D,
V [auth d]
photosystem II reaction center D2 protein
E,
W [auth e]
Cytochrome b559 alpha subunit
F,
X [auth f]
Cytochrome b559 beta subunit
G [auth H],
Y [auth h]
Photosystem II reaction center H protein
H [auth I],
Z [auth i]
Photosystem II reaction center I protein-
AA [auth j],
I [auth J]
Photosystem II reaction center J protein-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
S [auth a]
IPR005867Photosystem II protein D1Family
A,
S [auth a]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
A,
S [auth a]
IPR000484Photosynthetic reaction centre, L/MFamily
BA [auth k],
J [auth K]
IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
BA [auth k],
J [auth K]
IPR003687Photosystem II PsbKFamily
CA [auth l],
K [auth L]
IPR003372Photosystem II PsbLFamily
CA [auth l],
K [auth L]
IPR037266Photosystem II PsbL superfamilyHomologous Superfamily
DA [auth m],
L [auth M]
IPR007826Photosystem II PsbMFamily
DA [auth m],
L [auth M]
IPR037269Photosystem II PsbM superfamilyHomologous Superfamily
EA [auth o],
M [auth O]
IPR011250Outer membrane protein/outer membrane enzyme PagP, beta-barrelHomologous Superfamily
EA [auth o],
M [auth O]
IPR002628Photosystem II extrinsic protein OFamily
FA [auth t],
N [auth T]
IPR001743Photosystem II PsbTFamily
FA [auth t],
N [auth T]
IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
GA [auth u],
O [auth U]
IPR010527Photosystem II PsbU, oxygen evolving complexFamily
HA [auth v],
P [auth V]
IPR017851Photosystem II extrinsic protein V, cytochrome c-550 precursorFamily
HA [auth v],
P [auth V]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
HA [auth v],
P [auth V]
IPR009056Cytochrome c-like domainDomain
HA [auth v],
P [auth V]
IPR016003Photosystem II extrinsic protein V, cytochrome c-550 precursor-likeFamily
HA [auth v],
P [auth V]
IPR029490Cytochrome c-550 domainDomain
JA [auth z],
R [auth Z]
IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
JA [auth z],
R [auth Z]
IPR002644Photosystem II PsbZ, reaction centreFamily
B,
T [auth b]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
B,
T [auth b]
IPR000932Photosystem antenna protein-likeFamily
B,
T [auth b]
IPR017486Photosystem II CP47 reaction centre proteinFamily
C,
U [auth c]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
C,
U [auth c]
IPR000932Photosystem antenna protein-likeFamily
C,
U [auth c]
IPR005869Photosystem II CP43 reaction centre proteinFamily
C,
U [auth c]
IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
D,
V [auth d]
IPR005868Photosystem II D2Family
D,
V [auth d]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
D,
V [auth d]
IPR000484Photosynthetic reaction centre, L/MFamily
E,
W [auth e]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
E,
W [auth e]
IPR006217Photosystem II cytochrome b559, alpha subunitFamily
E,
W [auth e]
IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
E,
W [auth e]
IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
E,
W [auth e]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
F,
X [auth f]
IPR006241Photosystem II cytochrome b559, beta subunitFamily
F,
X [auth f]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
F,
X [auth f]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
G [auth H],
Y [auth h]
IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
G [auth H],
Y [auth h]
IPR001056Photosystem II reaction centre protein HFamily
H [auth I],
Z [auth i]
IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
H [auth I],
Z [auth i]
IPR003686Photosystem II PsbIFamily
AA [auth j],
I [auth J]
IPR002682Photosystem II PsbJFamily
AA [auth j],
I [auth J]
IPR037267Photosystem II PsbJ superfamilyHomologous Superfamily