2E9W | pdb_00002e9w

Crystal structure of the extracellular domain of Kit in complex with stem cell factor (SCF)


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Cd2e9wc1 All alpha proteins 4-helical cytokines 4-helical cytokines Short-chain cytokines Stem cell factor, SCF human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B Superfamily4-helical cytokines 8037106 3001717 SCOP2B (2022-06-29)
DSCOP2B Superfamily4-helical cytokines 8037106 3001717 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AIg_2e2e9wA8 A: alpha bundlesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: Ig_2ECOD (develop294)
Be2e9wB9 A: alpha bundlesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF:ECOD (develop294)
BIg_2e2e9wB13 A: alpha bundlesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: Ig_2ECOD (develop294)
Ce2e9wC1 A: alpha bundlesX: EGF-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF:ECOD (develop294)
DCsrAe2e9wD1 A: alpha bundlesX: HTHH: NudixT: NudixF: CsrAECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
C1.20.1250.10 Mainly Alpha Up-down Bundle Growth Hormone Chain: ACATH (4.3.0)
D1.20.1250.10 Mainly Alpha Up-down Bundle Growth Hormone Chain: ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00047Immunoglobulin domain (ig)Immunoglobulin domainMembers of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-prote ...Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Mast/stem cell growth factor receptor
C, D
Kit ligand

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, B
PharosP10721
C, D
PharosP21583