2JKN | pdb_00002jkn

DraE Adhesin in complex with Chloramphenicol Succinate (trigonal form)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d2jknf1	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	Bacterial adhesins	Dr-family adhesin	DraA/Afimbrial adhesin Afa-III	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
F	d2jknf2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
E	d2jkne1	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	Bacterial adhesins	Dr-family adhesin	DraA/Afimbrial adhesin Afa-III	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
E	d2jkne2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
D	d2jknd1	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	Bacterial adhesins	Dr-family adhesin	DraA/Afimbrial adhesin Afa-III	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
D	d2jknd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
C	d2jknc1	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	Bacterial adhesins	Dr-family adhesin	DraA/Afimbrial adhesin Afa-III	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
C	d2jknc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
B	d2jknb1	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	Bacterial adhesins	Dr-family adhesin	DraA/Afimbrial adhesin Afa-III	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
B	d2jknb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
A	d2jkna1	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	Bacterial adhesins	Dr-family adhesin	DraA/Afimbrial adhesin Afa-III	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
A	d2jkna2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	Bacterial adhesin-like	8040901	3000723	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Bacterial adhesin-like	8040901	3000723	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Bacterial adhesin-like	8040901	3000723	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Bacterial adhesin-like	8040901	3000723	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Bacterial adhesin-like	8040901	3000723	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Bacterial adhesin-like	8040901	3000723	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F		e2jknF1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: IL7	F:	ECOD (20:10:01)
E		e2jknE1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: IL7	F:	ECOD (20:10:01)
D		e2jknD1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: IL7	F:	ECOD (20:10:01)
C		e2jknC1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: IL7	F:	ECOD (20:10:01)
B		e2jknB1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: IL7	F:	ECOD (20:10:01)
A		e2jknA1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: IL7	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	2.60.40.1570	Mainly Beta	Sandwich	Immunoglobulin-like	Dr adhesin	CATH (4.3.0)
E	2.60.40.1570	Mainly Beta	Sandwich	Immunoglobulin-like	Dr adhesin	CATH (4.3.0)
D	2.60.40.1570	Mainly Beta	Sandwich	Immunoglobulin-like	Dr adhesin	CATH (4.3.0)
C	2.60.40.1570	Mainly Beta	Sandwich	Immunoglobulin-like	Dr adhesin	CATH (4.3.0)
B	2.60.40.1570	Mainly Beta	Sandwich	Immunoglobulin-like	Dr adhesin	CATH (4.3.0)
A	2.60.40.1570	Mainly Beta	Sandwich	Immunoglobulin-like	Dr adhesin	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	DR HEMAGGLUTININ STRUCTURAL SUBUNIT	-	-	pilus cell projection cellular anatomical structure

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR037028	Dr-adhesin superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR006713	Adhesin, Dr-family	Family
A, B, C, D, E A, B, C, D, E, F	IPR008966	Adhesion domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR021020	Adhesin, Dr family, signal peptide	PTM

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.