Annotations: 2KO2

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Reticulon	e2ko2A1	A: alpha arrays	X: Nogo-66 (From Topology)	H: Nogo-66 (From Topology)	T: Nogo-66	F: Reticulon	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.5.2480	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF02453	Reticulon (Reticulon)	Reticulon	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Reticulon-4	ubiquitin protein ligase binding protein binding binding ubiquitin-like protein ligase binding enzyme binding identical protein binding protein homodimerization activity protein dimerization activity	regulation of protein stability biological regulation regulation of biological quality protein stabilization cellular response to stimulus positive regulation of cell communication positive regulation of response to biotic stimulus regulation of toll-like receptor 9 signaling pathway regulation of cellular process positive regulation of signal transduction pattern recognition receptor signaling pathway response to stimulus regulation of signal transduction response to biotic stimulus regulation of protein stability biological regulation regulation of biological quality protein stabilization cellular response to stimulus positive regulation of cell communication positive regulation of response to biotic stimulus regulation of toll-like receptor 9 signaling pathway regulation of cellular process positive regulation of signal transduction pattern recognition receptor signaling pathway response to stimulus regulation of signal transduction response to biotic stimulus intracellular signal transduction cell communication immune response-activating signaling pathway positive regulation of immune response regulation of immune system process signal transduction positive regulation of immune system process innate immune response-activating signaling pathway regulation of biological process positive regulation of pattern recognition receptor signaling pathway immune response response to other organism regulation of innate immune response response to external stimulus positive regulation of intracellular signal transduction regulation of response to stimulus defense response to other organism regulation of pattern recognition receptor signaling pathway positive regulation of defense response toll-like receptor 9 signaling pathway activation of innate immune response regulation of immune response activation of immune response cytoplasmic pattern recognition receptor signaling pathway regulation of defense response regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms regulation of response to external stimulus intracellular receptor signaling pathway signaling positive regulation of biological process regulation of cytoplasmic pattern recognition receptor signaling pathway positive regulation of response to stimulus endolysosomal toll-like receptor signaling pathway positive regulation of response to external stimulus immune response-regulating signaling pathway regulation of intracellular signal transduction regulation of response to stress response to stress innate immune response response to external biotic stimulus positive regulation of toll-like receptor 9 signaling pathway positive regulation of cellular process regulation of signaling positive regulation of innate immune response defense response defense response to symbiont immune system process regulation of cell communication cellular process positive regulation of signaling cell migration involved in vasculogenesis developmental process multicellular organismal process cellular developmental process blood vessel morphogenesis tube development vasculogenesis vasculature development circulatory system development multicellular organism development anatomical structure morphogenesis tube morphogenesis cell differentiation anatomical structure development cell migration cell motility blood vessel development system development axon extension regulation of growth axonogenesis regulation of cellular component size developmental growth cell projection organization negative regulation of biological process regulation of cell differentiation regulation of neurogenesis neuron projection development regulation of cell development cell projection morphogenesis neuron differentiation negative regulation of growth neuron projection morphogenesis negative regulation of cellular component organization regulation of cell projection organization negative regulation of cell growth nervous system development developmental growth involved in morphogenesis generation of neurons negative regulation of axonogenesis negative regulation of developmental growth negative regulation of multicellular organismal process regulation of neuron projection development regulation of cellular component organization regulation of developmental process plasma membrane bounded cell projection morphogenesis cell development cell growth cell morphogenesis regulation of axon extension cellular component organization regulation of nervous system development neurogenesis negative regulation of neurogenesis regulation of extent of cell growth regulation of axonogenesis negative regulation of cellular process negative regulation of nervous system development regulation of multicellular organismal process negative regulation of cell differentiation cellular component organization or biogenesis negative regulation of cell projection organization regulation of anatomical structure morphogenesis regulation of cell size neuron projection extension regulation of multicellular organismal development regulation of developmental growth plasma membrane bounded cell projection organization developmental cell growth negative regulation of developmental process growth negative regulation of axon extension axon development regulation of cell growth cell morphogenesis involved in neuron differentiation negative regulation of neuron projection development negative regulation of cell development neuron development regulation of plasma membrane bounded cell projection organization regulation of anatomical structure size response to decreased oxygen levels cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus cellular response to stress response to hypoxia response to chemical response to oxygen levels response to abiotic stimulus regulation of cellular response to stress negative regulation of neuron projection regeneration regeneration neuron projection regeneration sprouting of injured axon formation of growth cone in injured axon response to wounding regulation of axon regeneration regulation of sprouting of injured axon regulation of formation of growth cone in injured axon negative regulation of response to external stimulus regulation of neuron projection regeneration negative regulation of axon regeneration response to axon injury regulation of response to wounding axon regeneration negative regulation of response to stimulus negative regulation of sprouting of injured axon negative regulation of response to wounding negative regulation of formation of growth cone in injured axon cell adhesion involved in sprouting angiogenesis angiogenesis sprouting angiogenesis cell adhesion anatomical structure formation involved in morphogenesis angiogenic sprout fusion leukocyte migration inflammatory response leukocyte migration involved in inflammatory response regulation of cell motility regulation of locomotion regulation of cell migration locomotion cellular homeostasis chemical homeostasis homeostatic process intracellular sphingolipid homeostasis intracellular chemical homeostasis lipid homeostasis trans-synaptic signaling modulation of chemical synaptic transmission cell-cell signaling chemical synaptic transmission synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling central nervous system vasculogenesis amyloid precursor protein catabolic process regulation of amide metabolic process regulation of amyloid-beta formation regulation of amyloid precursor protein catabolic process regulation of primary metabolic process negative regulation of amyloid precursor protein catabolic process amyloid-beta metabolic process protein metabolic process amide metabolic process amyloid precursor protein metabolic process negative regulation of protein metabolic process amyloid-beta formation negative regulation of macromolecule metabolic process negative regulation of amyloid-beta formation negative regulation of amide metabolic process regulation of protein metabolic process negative regulation of metabolic process primary metabolic process regulation of macromolecule metabolic process metabolic process macromolecule metabolic process regulation of metabolic process regulation of vasculogenesis negative regulation of vasculogenesis positive regulation of cell population proliferation mammary gland development gland development positive regulation of mammary gland epithelial cell proliferation positive regulation of developmental process epithelial cell proliferation epithelium development cell population proliferation positive regulation of epithelial cell proliferation animal organ development tissue development regulation of mammary gland epithelial cell proliferation mammary gland epithelium development regulation of cell population proliferation positive regulation of multicellular organismal process regulation of epithelial cell proliferation mammary gland epithelial cell proliferation heart development heart morphogenesis mesenchyme development epithelial to mesenchymal transition cardiac epithelial to mesenchymal transition animal organ morphogenesis mesenchymal cell differentiation regulation of immune effector process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of myeloid leukocyte cytokine production involved in immune response cytokine production regulation of cytokine production positive regulation of immune effector process positive regulation of macromolecule metabolic process myeloid leukocyte cytokine production cytokine production involved in immune response production of molecular mediator of immune response regulation of biosynthetic process regulation of cytokine production involved in immune response gene expression macromolecule biosynthetic process immune effector process regulation of gene expression biosynthetic process regulation of macrophage cytokine production positive regulation of gene expression positive regulation of cytokine production involved in immune response positive regulation of production of molecular mediator of immune response regulation of macromolecule biosynthetic process regulation of production of molecular mediator of immune response positive regulation of cytokine production positive regulation of macrophage cytokine production macrophage cytokine production neuron recognition neuron projection fasciculation axonal fasciculation cell recognition positive regulation of ERBB3 signaling pathway cell surface receptor protein tyrosine kinase signaling pathway positive regulation of ERBB signaling pathway enzyme-linked receptor protein signaling pathway regulation of ERBB signaling pathway cell surface receptor signaling pathway regulation of ERBB3 signaling pathway ERBB signaling pathway ERBB3 signaling pathway regulation of morphogenesis of a branching structure regulation of branching morphogenesis of a nerve morphogenesis of a branching structure branching morphogenesis of a nerve regulation of cell morphogenesis negative regulation of dendrite extension dendrite extension regulation of dendrite extension positive regulation of artery morphogenesis artery development regulation of artery morphogenesis artery morphogenesis small GTPase-mediated signal transduction regulation of small GTPase mediated signal transduction intracellular signaling cassette Rac protein signal transduction regulation of Rac protein signal transduction positive regulation of Rac protein signal transduction positive regulation of small GTPase mediated signal transduction chordate embryonic development embryo development in utero embryonic development blastocyst formation embryo development ending in birth or egg hatching blastocyst development membrane organization organelle organization endoplasmic reticulum membrane organization endoplasmic reticulum tubular network membrane organization endoplasmic reticulum tubular network organization endoplasmic reticulum organization endomembrane system organization cellular component biogenesis cellular component assembly endoplasmic reticulum tubular network formation positive regulation of locomotion positive regulation of cell migration positive regulation of cell motility myeloid leukocyte migration regulation of leukocyte migration positive regulation of neutrophil migration positive regulation of leukocyte migration neutrophil migration granulocyte migration regulation of neutrophil migration regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction phosphatidylinositol 3-kinase/protein kinase B signal transduction macrophage migration regulation of macrophage migration positive regulation of mononuclear cell migration regulation of mononuclear cell migration positive regulation of macrophage migration mononuclear cell migration regulation of hepatocyte proliferation liver development gland morphogenesis liver morphogenesis epithelial cell proliferation involved in liver morphogenesis hepatocyte proliferation hepaticobiliary system development positive regulation of hepatocyte proliferation regulation of postsynapse assembly cell junction assembly regulation of synapse structure or activity synapse organization regulation of synapse assembly postsynapse organization postsynapse assembly regulation of postsynapse organization regulation of cellular component biogenesis regulation of cell junction assembly regulation of synapse organization cell junction organization synapse assembly regulation of vasculature development positive regulation of angiogenesis positive regulation of vasculature development regulation of angiogenesis protein localization to lysosome protein localization localization cellular localization protein localization to organelle cellular macromolecule localization macromolecule localization protein localization to vacuole forebrain development glial cell migration telencephalon glial cell migration cerebral cortex development telencephalon cell migration forebrain cell migration gliogenesis cerebral cortex cell migration head development brain development cerebral cortex radially oriented cell migration pallium development central nervous system development cerebral cortex radial glia-guided migration telencephalon development nuclear pore organization protein-containing complex organization pore complex assembly nuclear pore complex assembly nucleus organization protein-containing complex assembly regulation of localization regulation of protein localization regulation of protein localization to endoplasmic reticulum regulation of cellular localization positive regulation of protein localization protein localization to endoplasmic reticulum positive regulation of protein localization to endoplasmic reticulum positive regulation of nervous system development collateral sprouting of injured axon positive regulation of sprouting of injured axon positive regulation of collateral sprouting positive regulation of cell development regulation of collateral sprouting positive regulation of cellular component organization positive regulation of cell differentiation positive regulation of neuron projection development positive regulation of neurogenesis positive regulation of axonogenesis collateral sprouting positive regulation of cell growth positive regulation of growth positive regulation of axon regeneration positive regulation of neuron projection regeneration positive regulation of cell projection organization positive regulation of developmental growth positive regulation of response to wounding regulation of collateral sprouting of injured axon positive regulation of collateral sprouting of injured axon positive regulation of epithelial cell migration tissue migration ameboidal-type cell migration epithelial cell migration regulation of epithelial cell migration epithelium migration	membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system dendrite terminus axon neuron projection plasma membrane bounded cell projection membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system dendrite terminus axon neuron projection plasma membrane bounded cell projection growth cone somatodendritic compartment cell projection distal axon dendritic growth cone dendrite dendritic tree site of polarized growth synapse cell junction glutamatergic synapse organelle subcompartment membrane endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm endoplasmic reticulum tubular network membrane organelle membrane endoplasmic reticulum tubular network endoplasmic reticulum membrane cell body neuronal cell body postsynapse anchoring junction cell periphery plasma membrane postsynaptic density neuron to neuron synapse postsynaptic specialization asymmetric synapse

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR046964	Reticulon 1-4	Family
A	IPR003388	Reticulon	Domain

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A	OPM				Reticulon

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.