2LK5 | pdb_00002lk5

Solution structure of the Zn(II) form of Desulforedoxin

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2lk5a_	Small proteins	Rubredoxin-like	Rubredoxin-like	Desulforedoxin	Desulforedoxin	(Megalodesulfovibrio gigas ) [TaxId: 879 ],	SCOPe (2.08)
B	d2lk5b_	Small proteins	Rubredoxin-like	Rubredoxin-like	Desulforedoxin	Desulforedoxin	(Megalodesulfovibrio gigas ) [TaxId: 879 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Rubredoxin-like	8039222	3001257	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Rubredoxin-like	8039222	3001257	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e2lk5A1	A: cradle loop barrel	X: RIFT-related	H: acid protease	T: C1-set	F:	ECOD (20:10:01)
B		e2lk5B1	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: FtsJ	F:	ECOD (20:10:01)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Desulforedoxin	cation binding transition metal ion binding iron ion binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR004462	Desulfoferrodoxin, N-terminal domain	Domain
A, B	IPR038094	Desulfoferrodoxin, N-terminal domain superfamily	Homologous Superfamily
A, B	IPR012002	Desulforedoxin	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.