2NZY | pdb_00002nzy

Crystal Structure of alpha1,3-Fucosyltransferase with GDP-fucose

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d2nzyc_	Alpha and beta proteins (a/b)	UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	FucT-like	Alpha1,3-fucosyltransferase FucT	(Helicobacter pylori ) [TaxId: 210 ],	SCOPe (2.08)
B	d2nzyb_	Alpha and beta proteins (a/b)	UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	FucT-like	Alpha1,3-fucosyltransferase FucT	(Helicobacter pylori ) [TaxId: 210 ],	SCOPe (2.08)
A	d2nzya_	Alpha and beta proteins (a/b)	UDP-Glycosyltransferase/glycogen phosphorylase	UDP-Glycosyltransferase/glycogen phosphorylase	FucT-like	Alpha1,3-fucosyltransferase FucT	(Helicobacter pylori ) [TaxId: 210 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	Type B glycosyltransferase-like	8034949	3001586	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Type B glycosyltransferase-like	8034949	3001586	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Type B glycosyltransferase-like	8034949	3001586	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C		e2nzyC1	A: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains	X: Snake toxin-like	H: Snake toxin-like	T: UPAR_LY6	F:	ECOD (20:10:01)
B		e2nzyB1	A: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains	X: Snake toxin-like	H: Snake toxin-like	T: UPAR_LY6	F:	ECOD (20:10:01)
A		e2nzyA1	A: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains	X: Snake toxin-like	H: Snake toxin-like	T: UPAR_LY6	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	3.40.50.11660	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycosyl transferase family 10, C-terminal domain	CATH (4.3.0)
C	3.40.50.11650	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycosyl transferase family 10, N-terminal domain	CATH (4.3.0)
B	3.40.50.11660	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycosyl transferase family 10, C-terminal domain	CATH (4.3.0)
B	3.40.50.11650	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycosyl transferase family 10, N-terminal domain	CATH (4.3.0)
A	3.40.50.11660	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycosyl transferase family 10, C-terminal domain	CATH (4.3.0)
A	3.40.50.11650	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycosyl transferase family 10, N-terminal domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Alpha1,3-Fucosyltransferase	binding fucose binding monosaccharide binding carbohydrate binding small molecule binding fucosyltransferase activity 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity glycosyltransferase activity alpha-(1->3)-fucosyltransferase activity transferase activity hexosyltransferase activity catalytic activity identical protein binding protein binding	lipopolysaccharide biosynthetic process carbohydrate derivative biosynthetic process carbohydrate metabolic process polysaccharide biosynthetic process carbohydrate biosynthetic process liposaccharide metabolic process lipid biosynthetic process carbohydrate derivative metabolic process primary metabolic process macromolecule biosynthetic process lipopolysaccharide metabolic process polysaccharide metabolic process biosynthetic process metabolic process lipopolysaccharide biosynthetic process carbohydrate derivative biosynthetic process carbohydrate metabolic process polysaccharide biosynthetic process carbohydrate biosynthetic process liposaccharide metabolic process lipid biosynthetic process carbohydrate derivative metabolic process primary metabolic process macromolecule biosynthetic process lipopolysaccharide metabolic process polysaccharide metabolic process biosynthetic process metabolic process cellular process macromolecule metabolic process lipid metabolic process Lewis a epitope biosynthetic process Lewis x epitope biosynthetic process	cellular anatomical structure membrane intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR055270	Fucosyltransferase, C-terminal	Domain
A, B, C	IPR038577	GT10-like, C-terminal domain superfamily	Homologous Superfamily
A, B, C	IPR041058	Alpha-(1,3)-fucosyltransferase FucT, N-terminal	Domain
A, B, C	IPR016646	Alpha-(1, 3)-fucosyltransferase/alpha-(1, 4)-fucosyltransferase, Helicobacter	Family
A, B, C	IPR001503	Glycosyl transferase family 10	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.