2O18 | pdb_00002o18

Crystal structure of a Thiamine biosynthesis lipoprotein apbE, NorthEast Strcutural Genomics target ER559


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyApbE-like 8101511 3001754 SCOP2B (2022-06-29)
CSCOP2 FamilyApbE-like 8101510 4003899 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyApbE-like 8101511 3001754 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyApbE-like 8101511 3001754 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyApbE-like 8101511 3001754 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
De2o18D3 A: Subtilisin-likeX: Subtilisin-likeH: Subtilisin-likeT: Ank_2, Ank_4, Ank_5F:ECOD (20:10:01)
Ce2o18C1 A: Thioredoxin-likeX: Thioredoxin-likeH: Thioredoxin-likeT: CBSF:ECOD (20:10:01)
Be2o18B1 A: Thioredoxin-likeX: Thioredoxin-likeH: Thioredoxin-likeT: CBSF:ECOD (20:10:01)
Ae2o18A3 A: Fusion glycoprotein F2X: Fusion glycoprotein F2H: Fusion glycoprotein F2T: PUAF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.10.520.10 Alpha Beta Roll T-fold ApbE-like domainsCATH (4.3.0)
C3.10.520.10 Alpha Beta Roll T-fold ApbE-like domainsCATH (4.3.0)
B3.10.520.10 Alpha Beta Roll T-fold ApbE-like domainsCATH (4.3.0)
A3.10.520.10 Alpha Beta Roll T-fold ApbE-like domainsCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF02424ApbE family (ApbE)ApbE family- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR003374ApbE-like superfamilyHomologous Superfamily
A, B, C, D
IPR024932Flavin transferase ApbEFamily