2P6U
Apo structure of the Hel308 superfamily 2 helicase
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2p6ua1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | automated matches | automated matches | (Archaeoglobus fulgidus ) [TaxId: 2234 ], | SCOPe (2.08) |
A | d2p6ua2 | All alpha proteins | Sec63 N-terminal domain-like | Sec63 N-terminal domain-like | automated matches | automated matches | (Archaeoglobus fulgidus ) [TaxId: 2234 ], | SCOPe (2.08) |
A | d2p6ua3 | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | automated matches | automated matches | (Archaeoglobus fulgidus ) [TaxId: 2234 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PRK02362_1st | e2p6uA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PRK02362_1st | ECOD (1.6) |
A | HHH_5_1 | e2p6uA2 | A: alpha arrays | X: HhH/H2TH | H: SAM-like subdomain in Sec63-like proteins (From Topology) | T: SAM-like subdomain in Sec63-like proteins | F: HHH_5_1 | ECOD (1.6) |
A | PRK02362_2nd | e2p6uA3 | A: alpha arrays | X: Sec63 N-terminal subdomain-like (From Topology) | H: Sec63 N-terminal subdomain-like (From Topology) | T: Sec63 N-terminal subdomain-like | F: PRK02362_2nd | ECOD (1.6) |
A | DEAD_1 | e2p6uA4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: DEAD_1 | ECOD (1.6) |
A | Helicase_C_5 | e2p6uA5 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Helicase_C_5 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
A | 1.10.3380.30 | Mainly Alpha | Orthogonal Bundle | Sec63 N-terminal domain-like fold | CATH (4.3.0) | |
A | 1.10.150.20 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |