2QO3
Crystal Structure of [KS3][AT3] didomain from module 3 of 6-deoxyerthronolide B synthase
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Probable ACP-binding domain of malonyl-CoA ACP transacylase | 8055834 | 3001224 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | FabD/lysophospholipase-like | 8055831 | 3001121 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | KASAT domain-like | 8055827 | 3002319 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | FabD/lysophospholipase-like | 8055831 | 3001121 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Thiolase-like | 8055829 | 3000122 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | KASAT domain-like | 8055827 | 3002319 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | KASAT domain-like | 8045094 | 4004293 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | Thiolase-related | 8055828 | 4000245 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | FabD-like | 8055830 | 4003614 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | Probable ACP-binding domain of malonyl-CoA ACP transacylase | 8055832 | 4001289 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | KASAT domain-like | 8055827 | 3002319 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Thiolase-like | 8055829 | 3000122 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | FabD/lysophospholipase-like | 8055831 | 3001121 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Probable ACP-binding domain of malonyl-CoA ACP transacylase | 8055834 | 3001224 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Acyl_transf_1_2nd_1 | e2qo3B3 | A: a+b two layers | X: Alpha-beta plaits | H: Probable ACP-binding domain of malonyl-CoA ACP transacylase (From Topology) | T: Probable ACP-binding domain of malonyl-CoA ACP transacylase | F: Acyl_transf_1_2nd_1 | ECOD (1.6) |
| B | PksD_2 | e2qo3B4 | A: a+b two layers | X: KS-MAT linker domain in fatty acid synthase (From Topology) | H: KS-MAT linker domain in fatty acid synthase (From Topology) | T: KS-MAT linker domain in fatty acid synthase | F: PksD_2 | ECOD (1.6) |
| B | PksD,Acyl_transf_1_1st | e2qo3B6 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: FabD/lysophospholipase-like | F: PksD,Acyl_transf_1_1st | ECOD (1.6) |
| B | ketoacyl-synt | e2qo3B5 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: ketoacyl-synt | ECOD (1.6) |
| B | Ketoacyl-synt_C | e2qo3B2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: Ketoacyl-synt_C | ECOD (1.6) |
| A | Acyl_transf_1_2nd_1 | e2qo3A4 | A: a+b two layers | X: Alpha-beta plaits | H: Probable ACP-binding domain of malonyl-CoA ACP transacylase (From Topology) | T: Probable ACP-binding domain of malonyl-CoA ACP transacylase | F: Acyl_transf_1_2nd_1 | ECOD (1.6) |
| A | PksD_2 | e2qo3A5 | A: a+b two layers | X: KS-MAT linker domain in fatty acid synthase (From Topology) | H: KS-MAT linker domain in fatty acid synthase (From Topology) | T: KS-MAT linker domain in fatty acid synthase | F: PksD_2 | ECOD (1.6) |
| A | PksD,Acyl_transf_1_1st | e2qo3A7 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: FabD/lysophospholipase-like | F: PksD,Acyl_transf_1_1st | ECOD (1.6) |
| A | ketoacyl-synt | e2qo3A1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: ketoacyl-synt | ECOD (1.6) |
| A | Ketoacyl-synt_C | e2qo3A6 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: Ketoacyl-synt_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (4.3.0) |
| B | 3.30.70.3290 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
| B | 3.40.366.10 | Alpha Beta | 3-Layer(aba) Sandwich | Malonyl-Coenzyme A Acyl Carrier Protein | domain 2 | CATH (4.3.0) |
| A | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (4.3.0) |
| A | 3.30.70.3290 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
| A | 3.40.366.10 | Alpha Beta | 3-Layer(aba) Sandwich | Malonyl-Coenzyme A Acyl Carrier Protein | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF02801 | Beta-ketoacyl synthase, C-terminal domain (Ketoacyl-synt_C) | Beta-ketoacyl synthase, C-terminal domain | The structure of beta-ketoacyl synthase is similar to that of the thiolase family (Pfam:PF00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. | Domain | |
| PF00109 | Beta-ketoacyl synthase, N-terminal domain (ketoacyl-synt) | Beta-ketoacyl synthase, N-terminal domain | The structure of beta-ketoacyl synthase is similar to that of the thiolase family (Pfam:PF00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains m ... | Domain | |
| PF16197 | Ketoacyl-synthetase C-terminal extension (KAsynt_C_assoc) | Ketoacyl-synthetase C-terminal extension | - | Family | |
| PF00698 | Acyl transferase domain (Acyl_transf_1) | Acyl transferase domain | - | Domain |
