2QYS | pdb_00002qys

Structure of Eugenol Synthase from Ocimum basilicum

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2qysa_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	sweet basil (Ocimum basilicum ) [TaxId: 39350 ],	SCOPe (2.08)
B	d2qysb_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	sweet basil (Ocimum basilicum ) [TaxId: 39350 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	SDR-like	8088949	3000038	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	SDR-like	8088949	3000038	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Proteasome	e2qysA1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Proteasome	ECOD (develop294)
B	Proteasome	e2qysB1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Proteasome	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
A	3.90.25.10	Alpha Beta	Alpha-Beta Complex	UDP-galactose 4-epimerase	domain 1	CATH (4.3.0)
B	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
B	3.90.25.10	Alpha Beta	Alpha-Beta Complex	UDP-galactose 4-epimerase	domain 1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Eugenol synthase 1	oxidoreductase activity catalytic activity identical protein binding protein binding binding protein homodimerization activity protein dimerization activity nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	phenylpropanoid metabolic process eugenol metabolic process benzene-containing compound metabolic process olefinic compound biosynthetic process phenylpropanoid biosynthetic process secondary metabolic process ether biosynthetic process biosynthetic process secondary metabolite biosynthetic process phenol-containing compound metabolic process phenol-containing compound biosynthetic process olefinic compound metabolic process metabolic process cellular process phenylpropanoid metabolic process eugenol metabolic process benzene-containing compound metabolic process olefinic compound biosynthetic process phenylpropanoid biosynthetic process secondary metabolic process ether biosynthetic process biosynthetic process secondary metabolite biosynthetic process phenol-containing compound metabolic process phenol-containing compound biosynthetic process olefinic compound metabolic process metabolic process cellular process eugenol biosynthetic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR008030	NmrA-like domain	Domain
A, B	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A, B	IPR050608	NmrA-type oxidoreductase, Isoflavone reductase subfamily	Family
A, B	IPR045312	Phenylcoumaran benzylic ether reductase-like	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.