Low resolution structures of bovine mitochondrial F1-ATPase during controlled dehydration: Hydration State 4A.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018243 | 3002019 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018248 | 3001034 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056868 | 3000684 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056868 | 3000684 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018243 | 3002019 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018248 | 3001034 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056868 | 3000684 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018243 | 3002019 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018248 | 3001034 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | ATP synthase gamma subunit-like | 8044412 | 3000451 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase C-terminal domain | 8037350 | 3000785 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Epsilon subunit of F1F0-ATP synthase N-terminal domain | 8037352 | 3000182 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | epsilon subunit of mitochondrial F1F0-ATP synthase | 8037353 | 3001799 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018253 | 3002019 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056904 | 3000684 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018258 | 3001034 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018253 | 3002019 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018258 | 3001034 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056904 | 3000684 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056904 | 3000684 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018253 | 3002019 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018258 | 3001034 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | Copper-bind | e2w6hC1 | A: alpha bundles | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Copper-bind | ECOD (develop294) |
| B | Copper-bind | e2w6hB1 | A: alpha bundles | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Copper-bind | ECOD (develop294) |
| A | Copper-bind | e2w6hA1 | A: alpha bundles | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Copper-bind | ECOD (develop294) |
| G | PHP | e2w6hG2 | A: alpha bundles | X: Fusion glycoprotein F2 | H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | F: PHP | ECOD (develop294) |
| H | Flavi_glycoprot | e2w6hH1 | A: alpha bundles | X: Cystatin-like | H: Cupredoxin-related | T: Cupredoxin-related | F: Flavi_glycoprot | ECOD (develop294) |
| I | Flavi_glycoprot | e2w6hI1 | A: alpha bundles | X: Cystatin-like | H: Cupredoxin-related | T: Cupredoxin-related | F: Flavi_glycoprot | ECOD (develop294) |
| F | Copper-bind | e2w6hF1 | A: alpha bundles | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Copper-bind | ECOD (develop294) |
| E | Copper-bind | e2w6hE1 | A: alpha bundles | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Copper-bind | ECOD (develop294) |
| D | Copper-bind | e2w6hD1 | A: alpha bundles | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Copper-bind | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
| PF00306 | ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C) | ATP synthase alpha/beta chain, C terminal domain | Domain | ||
| PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain | |
| PF00231 | ATP synthase (ATP-synt) | ATP synthase | Domain | ||
| PF02823 | ATP synthase, Delta/Epsilon chain, beta-sandwich domain (ATP-synt_DE_N) | ATP synthase, Delta/Epsilon chain, beta-sandwich domain | Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensit ... | Domain | |
| PF21335 | Metazoan delta subunit of F1F0-ATP synthase, C-terminal domain (ATPD_C_metazoa) | Metazoan delta subunit of F1F0-ATP synthase, C-terminal domain | F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core, and F0 which contains the membrane proton channel. This entry includes ATP synthase subunit delta from animals (called epsilon in bacteria or chlorop ... | Domain | |
| PF04627 | Mitochondrial ATP synthase epsilon chain (ATP-synt_Eps) | Mitochondrial ATP synthase epsilon chain | - | Family | |
| PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
| PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain | |
| PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |














