2WCV | pdb_00002wcv

Crystal structure of bacterial FucU

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2wcvb_	Alpha and beta proteins (a/b)	RbsD-like	RbsD-like	automated matches	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
C	d2wcvc_	Alpha and beta proteins (a/b)	RbsD-like	RbsD-like	automated matches	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
D	d2wcvd_	Alpha and beta proteins (a/b)	RbsD-like	RbsD-like	automated matches	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
E	d2wcve_	Alpha and beta proteins (a/b)	RbsD-like	RbsD-like	automated matches	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
F	d2wcvf_	Alpha and beta proteins (a/b)	RbsD-like	RbsD-like	automated matches	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
G	d2wcvg_	Alpha and beta proteins (a/b)	RbsD-like	RbsD-like	automated matches	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
H	d2wcvh_	Alpha and beta proteins (a/b)	RbsD-like	RbsD-like	automated matches	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
I	d2wcvi_	Alpha and beta proteins (a/b)	RbsD-like	RbsD-like	automated matches	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
J	d2wcvj_	Alpha and beta proteins (a/b)	RbsD-like	RbsD-like	automated matches	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
A	d2wcva_	Alpha and beta proteins (a/b)	RbsD-like	RbsD-like	automated matches	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	RbsD-like	8060321	3000903	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	RbsD-like	8060321	3000903	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	RbsD-like	8060321	3000903	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	RbsD-like	8060321	3000903	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	RbsD-like	8060321	3000903	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	RbsD-like	8060321	3000903	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	RbsD-like	8060321	3000903	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	RbsD-like	8060321	3000903	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	RbsD-like	8060321	3000903	SCOP2B (2022-06-29)
A	SCOP2 Family	RbsD-like	8060320	4001142	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	RbsD-like	8060321	3000903	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e2wcvB1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: ATP-synt_ab_N	F:	ECOD (20:10:01)
C		e2wcvC1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: ATP-synt_ab_N	F:	ECOD (20:10:01)
D		e2wcvD1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: ATP-synt_ab_N	F:	ECOD (20:10:01)
E		e2wcvE1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: ATP-synt_ab_N	F:	ECOD (20:10:01)
F		e2wcvF1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: ATP-synt_ab_N	F:	ECOD (20:10:01)
G		e2wcvG1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: ATP-synt_ab_N	F:	ECOD (20:10:01)
H		e2wcvH1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: ATP-synt_ab_N	F:	ECOD (20:10:01)
I		e2wcvI1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: ATP-synt_ab_N	F:	ECOD (20:10:01)
J		e2wcvJ1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: ATP-synt_ab_N	F:	ECOD (20:10:01)
A		e2wcvA1	A: Cystatin-like	X: NTF2-like	H: NTF2-like	T: PA_decarbox	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.1650.10	Alpha Beta	3-Layer(aba) Sandwich	RbsD-like fold	RbsD-like domain	CATH (4.3.0)
C	3.40.1650.10	Alpha Beta	3-Layer(aba) Sandwich	RbsD-like fold	RbsD-like domain	CATH (4.3.0)
D	3.40.1650.10	Alpha Beta	3-Layer(aba) Sandwich	RbsD-like fold	RbsD-like domain	CATH (4.3.0)
E	3.40.1650.10	Alpha Beta	3-Layer(aba) Sandwich	RbsD-like fold	RbsD-like domain	CATH (4.3.0)
F	3.40.1650.10	Alpha Beta	3-Layer(aba) Sandwich	RbsD-like fold	RbsD-like domain	CATH (4.3.0)
G	3.40.1650.10	Alpha Beta	3-Layer(aba) Sandwich	RbsD-like fold	RbsD-like domain	CATH (4.3.0)
H	3.40.1650.10	Alpha Beta	3-Layer(aba) Sandwich	RbsD-like fold	RbsD-like domain	CATH (4.3.0)
I	3.40.1650.10	Alpha Beta	3-Layer(aba) Sandwich	RbsD-like fold	RbsD-like domain	CATH (4.3.0)
J	3.40.1650.10	Alpha Beta	3-Layer(aba) Sandwich	RbsD-like fold	RbsD-like domain	CATH (4.3.0)
A	3.40.1650.10	Alpha Beta	3-Layer(aba) Sandwich	RbsD-like fold	RbsD-like domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	PF05025	RbsD / FucU transport protein family (RbsD_FucU)	RbsD / FucU transport protein family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	L-FUCOSE MUTAROTASE	isomerase activity D-ribose pyranase activity catalytic activity intramolecular transferase activity L-fucose mutarotase activity racemase and epimerase activity racemase and epimerase activity, acting on carbohydrates and derivatives binding fucose binding monosaccharide binding carbohydrate binding small molecule binding identical protein binding protein binding	monosaccharide metabolic process carbohydrate metabolic process hexose metabolic process small molecule metabolic process metabolic process cellular process primary metabolic process fucose metabolic process L-fucose metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR023750	RbsD-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR007721	D-ribose pyranase RbsD/L-fucose mutarotase FucU	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR023751	L-fucose mutarotase	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR050443	RbsD/FucU L-fucose mutarotase	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.