2WMJ | pdb_00002wmj

Crystal structure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 (Sp3GH98) in complex with the B-trisaccharide blood group antigen.

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd2wmjb2 All beta proteins Hyaluronate lyase-like, C-terminal domain Glycosyl hydrolase family 98 C-terminal domain-like automated matches automated matches (Streptococcus pneumoniae SP3-BS71 ) [TaxId: 406556 ], SCOPe (2.08)
Bd2wmjb1 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases automated matches automated matches (Streptococcus pneumoniae SP3-BS71 ) [TaxId: 406556 ], SCOPe (2.08)
Ad2wmja2 All beta proteins Hyaluronate lyase-like, C-terminal domain Glycosyl hydrolase family 98 C-terminal domain-like automated matches automated matches (Streptococcus pneumoniae SP3-BS71 ) [TaxId: 406556 ], SCOPe (2.08)
Ad2wmja1 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases automated matches automated matches (Streptococcus pneumoniae SP3-BS71 ) [TaxId: 406556 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BGlycolytice2wmjB1 A: a/b three-layered sandwichesX: YrdC/RibBH: YrdC/RibBT: YrdC/RibBF: GlycolyticECOD (v294.1)
Ae2wmjA1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Thioredoxin-likeT: Thioredoxin-likeF:ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
B3.30.2330.20 Alpha Beta 2-Layer Sandwich arginine biosynthesis bifunctional protein fold family 98 glycoside hydrolaseCATH (4.3.0)
B2.60.220.10 Mainly Beta Sandwich Chondroitinase Ac Chain A, domain 3CATH (4.3.0)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A3.30.2330.20 Alpha Beta 2-Layer Sandwich arginine biosynthesis bifunctional protein fold family 98 glycoside hydrolaseCATH (4.3.0)
A2.60.220.10 Mainly Beta Sandwich Chondroitinase Ac Chain A, domain 3CATH (4.3.0)