2Y9J | pdb_00002y9j

THREE-DIMENSIONAL MODEL OF SALMONELLA'S NEEDLE COMPLEX AT SUBNANOMETER RESOLUTION


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ZSCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
VA [auth v]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
VA [auth v]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
UA [auth u]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
UA [auth u]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
TA [auth t]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
TA [auth t]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
SA [auth s]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
SA [auth s]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
RA [auth r]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
RA [auth r]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
QA [auth q]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
QA [auth q]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
PA [auth p]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
PA [auth p]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
OA [auth o]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
OA [auth o]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
NA [auth n]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
NA [auth n]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
MA [auth m]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
MA [auth m]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
LA [auth l]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
LA [auth l]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
KA [auth k]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
KA [auth k]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
JA [auth j]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
JA [auth j]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
IA [auth i]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
IA [auth i]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
HA [auth h]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
HA [auth h]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
GA [auth g]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
GA [auth g]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
FA [auth f]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
FA [auth f]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
EA [auth e]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
EA [auth e]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
DA [auth d]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
DA [auth d]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
CA [auth c]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
CA [auth c]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
AA [auth a]SCOP2B SuperfamilyBON domain-like 8092191 3002566 SCOP2B (2022-06-29)
AA [auth a]SCOP2B SuperfamilyNRho-like 8092192 3002569 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ZPkinase,Pkinase_Ce2y9jZ1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
YRibonuc_L-PSPe2y9jY2 A: alpha bundlesX: N-terminal beta-sandwich domain in anthrax protective antigenH: N-terminal beta-sandwich domain in anthrax protective antigenT: N-terminal beta-sandwich domain in anthrax protective antigenF: Ribonuc_L-PSPECOD (develop294)
VA [auth v]Pkinase,Pkinase_Ce2y9jv1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
UA [auth u]Pkinase,Pkinase_Ce2y9ju1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
TA [auth t]Pkinase,Pkinase_Ce2y9jt1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
SA [auth s]Pkinase,Pkinase_Ce2y9js1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
RA [auth r]Pkinase,Pkinase_Ce2y9jr1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
QA [auth q]Pkinase,Pkinase_Ce2y9jq1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
PA [auth p]Pkinase,Pkinase_Ce2y9jp1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
OA [auth o]Pkinase,Pkinase_Ce2y9jo1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
NA [auth n]Pkinase,Pkinase_Ce2y9jn1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
MA [auth m]Pkinase,Pkinase_Ce2y9jm1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
LA [auth l]Pkinase,Pkinase_Ce2y9jl1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
KA [auth k]Pkinase,Pkinase_Ce2y9jk1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
JA [auth j]Pkinase,Pkinase_Ce2y9jj1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
IA [auth i]Pkinase,Pkinase_Ce2y9ji1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
HA [auth h]Pkinase,Pkinase_Ce2y9jh1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
GA [auth g]Pkinase,Pkinase_Ce2y9jg1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
FA [auth f]Pkinase,Pkinase_Ce2y9jf1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
EA [auth e]Pkinase,Pkinase_Ce2y9je1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
DA [auth d]Pkinase,Pkinase_Ce2y9jd1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
CA [auth c]Pkinase,Pkinase_Ce2y9jc1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
BA [auth b]Pkinase,Pkinase_Ce2y9jb1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
AA [auth a]Pkinase,Pkinase_Ce2y9ja1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
XFapy_DNA_glycoe2y9jX4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
WFapy_DNA_glycoe2y9jW4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
VFapy_DNA_glycoe2y9jV4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
UFapy_DNA_glycoe2y9jU4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
TFapy_DNA_glycoe2y9jT4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
SFapy_DNA_glycoe2y9jS4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
RFapy_DNA_glycoe2y9jR4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
QFapy_DNA_glycoe2y9jQ4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
PFapy_DNA_glycoe2y9jP4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
OFapy_DNA_glycoe2y9jO4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
NFapy_DNA_glycoe2y9jN4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
MFapy_DNA_glycoe2y9jM4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
LFapy_DNA_glycoe2y9jL4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
KFapy_DNA_glycoe2y9jK4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
JFapy_DNA_glycoe2y9jJ4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
IFapy_DNA_glycoe2y9jI4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
HFapy_DNA_glycoe2y9jH4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
GFapy_DNA_glycoe2y9jG4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
FFapy_DNA_glycoe2y9jF4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
EFapy_DNA_glycoe2y9jE4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
DFapy_DNA_glycoe2y9jD4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
CFapy_DNA_glycoe2y9jC4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
BFapy_DNA_glycoe2y9jB4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)
AFapy_DNA_glycoe2y9jA4 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Fapy_DNA_glycoECOD (develop294)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR006182Flagellar M-ring, N-terminalDomain
IPR045851AMP-binding enzyme domain superfamilyHomologous Superfamily
IPR043427Lipoprotein YscJ/Flagellar M-ring proteinFamily
IPR003282Type III secretion system lipoprotein SctJFamily
A, B, C, D, E
IPR019029Type III secretion system, PrgH/EprH-likeFamily
A, B, C, D, E
IPR013387Type III secretion system, PrgH/EprHFamily