3CMB | pdb_00003cmb

Crystal structure of acetoacetate decarboxylase (YP_001047042.1) from Methanoculleus marisnigri JR1 at 1.60 A resolution

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd3cmbd2 Alpha and beta proteins (a+b) Acetoacetate decarboxylase-like Acetoacetate decarboxylase-like Acetoacetate decarboxylase-like Acetoacetate decarboxylase (Methanoculleus marisnigri JR1 ) [TaxId: 368407 ], SCOPe (2.08)
Dd3cmbd3 Artifacts Tags Tags Tags N-terminal Tags (Methanoculleus marisnigri JR1 ) [TaxId: 368407 ], SCOPe (2.08)
Cd3cmbc2 Alpha and beta proteins (a+b) Acetoacetate decarboxylase-like Acetoacetate decarboxylase-like Acetoacetate decarboxylase-like Acetoacetate decarboxylase (Methanoculleus marisnigri JR1 ) [TaxId: 368407 ], SCOPe (2.08)
Cd3cmbc3 Artifacts Tags Tags Tags N-terminal Tags (Methanoculleus marisnigri JR1 ) [TaxId: 368407 ], SCOPe (2.08)
Bd3cmbb2 Alpha and beta proteins (a+b) Acetoacetate decarboxylase-like Acetoacetate decarboxylase-like Acetoacetate decarboxylase-like Acetoacetate decarboxylase (Methanoculleus marisnigri JR1 ) [TaxId: 368407 ], SCOPe (2.08)
Bd3cmbb3 Artifacts Tags Tags Tags N-terminal Tags (Methanoculleus marisnigri JR1 ) [TaxId: 368407 ], SCOPe (2.08)
Ad3cmba1 Alpha and beta proteins (a+b) Acetoacetate decarboxylase-like Acetoacetate decarboxylase-like Acetoacetate decarboxylase-like Acetoacetate decarboxylase (Methanoculleus marisnigri JR1 ) [TaxId: 368407 ], SCOPe (2.08)
Ad3cmba2 Artifacts Tags Tags Tags N-terminal Tags (Methanoculleus marisnigri JR1 ) [TaxId: 368407 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyAcetoacetate decarboxylase-like 8040174 3000322 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyAcetoacetate decarboxylase-like 8040174 3000322 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyAcetoacetate decarboxylase-like 8040174 3000322 SCOP2B (2022-06-29)
ASCOP2 FamilyAcetoacetate decarboxylase-like 8027795 4001738 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyAcetoacetate decarboxylase-like 8040174 3000322 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DCatalasee3cmbD1 A: alpha bundlesX: Cloacin translocation domainH: beta-Prism IT: beta-Prism IF: CatalaseECOD (develop294)
CCatalasee3cmbC1 A: alpha bundlesX: Cloacin translocation domainH: beta-Prism IT: beta-Prism IF: CatalaseECOD (develop294)
BCatalasee3cmbB1 A: alpha bundlesX: Cloacin translocation domainH: beta-Prism IT: beta-Prism IF: CatalaseECOD (develop294)
AADCe3cmbA1 A: beta barrelsX: Acetoacetate decarboxylase-likeH: Acetoacetate decarboxylase-likeT: Acetoacetate decarboxylase-likeF: ADCECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.40.400.10 Mainly Beta Beta Barrel Acetoacetate decarboxylase-like Acetoacetate decarboxylase-likeCATH (4.3.0)
C2.40.400.10 Mainly Beta Beta Barrel Acetoacetate decarboxylase-like Acetoacetate decarboxylase-likeCATH (4.3.0)
B2.40.400.10 Mainly Beta Beta Barrel Acetoacetate decarboxylase-like Acetoacetate decarboxylase-likeCATH (4.3.0)
A2.40.400.10 Mainly Beta Beta Barrel Acetoacetate decarboxylase-like Acetoacetate decarboxylase-likeCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Acetoacetate decarboxylase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR010451Acetoacetate decarboxylaseFamily
A, B, C, D
IPR023375Acetoacetate decarboxylase domain superfamilyHomologous Superfamily