Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
R [auth U]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068575 3000806 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068575 3000806 SCOP2B (2022-06-29)
Q [auth T]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8073735 3000770 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8073735 3000770 SCOP2B (2022-06-29)
P [auth S]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068577 3000797 SCOP2B (2022-06-29)
FSCOP2 Family14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068576 4002070 SCOP2 (2022-06-29)
FSCOP2 Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068577 3000797 SCOP2 (2022-06-29)
M [auth P]SCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8042105 3000966 SCOP2B (2022-06-29)
M [auth P]SCOP2B SuperfamilyTransmembrane di-heme cytochromes 8042108 3000517 SCOP2B (2022-06-29)
CSCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8042105 3000966 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyTransmembrane di-heme cytochromes 8042108 3000517 SCOP2B (2022-06-29)
T [auth W]SCOP2 FamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068588 4002059 SCOP2 (2022-06-29)
T [auth W]SCOP2 SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068589 3000779 SCOP2 (2022-06-29)
JSCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068589 3000779 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
S [auth V]e3cwbV2 A: Fusion glycoprotein F2X: Fusion glycoprotein F2H: Fusion glycoprotein F2T: Ribonuclease_3F:ECOD (20:10:01)
Ie3cwbI1 A: Profilin-likeX: sensor domainsH: sensor domainsT: Methyltransf_2F:ECOD (20:10:01)
R [auth U]e3cwbU1 A: HTHX: HTHH: tetra-helical, lambda repressor-likeT: LipocalinF:ECOD (20:10:01)
He3cwbH1 A: Profilin-likeX: sensor domainsH: sensor domainsT: Methyltransf_2F:ECOD (20:10:01)
Q [auth T]e3cwbT1 A: HTHX: HTHH: tetra-helical, lambda repressor-likeT: LipocalinF:ECOD (20:10:01)
Ge3cwbG1 A: Profilin-likeX: sensor domainsH: sensor domainsT: Methyltransf_2F:ECOD (20:10:01)
P [auth S]e3cwbS1 A: HTHX: HTHH: tetra-helical, lambda repressor-likeT: LipocalinF:ECOD (20:10:01)
Fe3cwbF1 A: Profilin-likeX: sensor domainsH: sensor domainsT: Methyltransf_2F:ECOD (20:10:01)
O [auth R]e3cwbR2 A: amino-terminal domain of OmpATbX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: Peptidase_M23F:ECOD (20:10:01)
O [auth R]e3cwbR3 A: TIM beta/alpha-barrelX: TIM barrelsH: TIM barrelsT: GelsolinF:ECOD (20:10:01)
Ee3cwbE2 A: amino-terminal domain of OmpATbX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: Peptidase_M23F:ECOD (20:10:01)
Ee3cwbE3 A: TIM beta/alpha-barrelX: TIM barrelsH: TIM barrelsT: GelsolinF:ECOD (20:10:01)
N [auth Q]e3cwbQ1 A: HTHX: HTHH: tetra-helical, lambda repressor-likeT: LipocalinF:ECOD (20:10:01)
De3cwbD1 A: Profilin-likeX: sensor domainsH: sensor domainsT: ResolvaseF:ECOD (20:10:01)
M [auth P]e3cwbP1 A: C-terminal subdomain in Lon-related proteases catalytic domainsX: p53 tetramerization domainH: p53 tetramerization domainT: Cation_effluxF:ECOD (20:10:01)
Ce3cwbC1 A: C-terminal subdomain in Lon-related proteases catalytic domainsX: p53 tetramerization domainH: p53 tetramerization domainT: Cation_effluxF:ECOD (20:10:01)
L [auth O]e3cwbO1 A: HTHX: HTHH: tetra-helical, lambda repressor-likeT: LipocalinF:ECOD (20:10:01)
Be3cwbB1 A: Profilin-likeX: sensor domainsH: sensor domainsT: Peptidase_M16_CF:ECOD (20:10:01)
T [auth W]e3cwbW1 A: HTHX: HTHH: tetra-helical, lambda repressor-likeT: LipocalinF:ECOD (20:10:01)
Je3cwbJ1 A: Profilin-likeX: sensor domainsH: sensor domainsT: Methyltransf_2F:ECOD (20:10:01)
K [auth N]e3cwbN1 A: HTHX: HTHH: tetra-helical, lambda repressor-likeT: LipocalinF:ECOD (20:10:01)
Ae3cwbA1 A: Profilin-likeX: sensor domainsH: sensor domainsT: Peptidase_M16_CF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
S [auth V]2.10.210.10 Mainly Beta Ribbon Cytochrome Bc1 Complex Chain ICATH (4.3.0)
I2.10.210.10 Mainly Beta Ribbon Cytochrome Bc1 Complex Chain ICATH (4.3.0)
R [auth U]1.10.287.20 Mainly Alpha Orthogonal Bundle Helix Hairpins Ubiquinol-cytochrome C reductase hinge domainCATH (4.3.0)
H1.10.287.20 Mainly Alpha Orthogonal Bundle Helix Hairpins Ubiquinol-cytochrome C reductase hinge domainCATH (4.3.0)
Q [auth T]1.20.5.210 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 8CATH (4.3.0)
G1.20.5.210 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 8CATH (4.3.0)
P [auth S]1.10.1090.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain FCATH (4.3.0)
F1.10.1090.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain FCATH (4.3.0)
O [auth R]1.20.5.270 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Ubiquinol cytochrome reductase, transmembrane domainCATH (4.3.0)
O [auth R]2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (4.3.0)
E1.20.5.270 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Ubiquinol cytochrome reductase, transmembrane domainCATH (4.3.0)
E2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (4.3.0)
N [auth Q]1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
N [auth Q]1.20.5.100 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome c1, transmembrane anchor, C-terminalCATH (4.3.0)
D1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
D1.20.5.100 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome c1, transmembrane anchor, C-terminalCATH (4.3.0)
M [auth P]1.20.810.10 Mainly Alpha Up-down Bundle Cytochrome Bc1 Complex Chain CCATH (4.3.0)
C1.20.810.10 Mainly Alpha Up-down Bundle Cytochrome Bc1 Complex Chain CCATH (4.3.0)
L [auth O]3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
B3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
T [auth W]1.20.5.260 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 9CATH (4.3.0)
J1.20.5.260 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 9CATH (4.3.0)
K [auth N]3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
A3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I,
S [auth V]
PF09165Ubiquinol-cytochrome c reductase 8 kDa, N-terminal (Ubiq-Cytc-red_N)Ubiquinol-cytochrome c reductase 8 kDa, N-terminalMembers of this family adopt a structure consisting of many antiparallel beta sheets, with few alpha helices, in a non-globular arrangement. They are required for proper functioning of the respiratory chain [1]. Domain
E,
O [auth R]
PF02921Ubiquinol cytochrome reductase transmembrane region (UCR_TM)Ubiquinol cytochrome reductase transmembrane region- Family
E,
O [auth R]
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
C,
M [auth P]
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petDDomain
C,
M [auth P]
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petBDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I,
S [auth V]
MITOCHONDRIAL UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT, leader sequence
H,
R [auth U]
MITOCHONDRIAL UBIQUINOL-CYTOCHROME C REDUCTASE 11 KDA PROTEIN, COMPLEX III SUBUNIT VIII-
G,
Q [auth T]
MITOCHONDRIAL UBIQUINOL-CYTOCHROME C REDUCTASE UBIQUINONE-BINDING PROTEIN QP-C-
F,
P [auth S]
MITOCHONDRIAL UBIQUINOL-CYTOCHROME C REDUCTASE 14 KDA PROTEIN-
E,
O [auth R]
MITOCHONDRIAL UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR PROTEIN
D,
N [auth Q]
MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN---
C,
M [auth P]
Cytochrome b
B,
L [auth O]
MITOCHONDRIAL UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN 2 -
J,
T [auth W]
MITOCHONDRIAL UBIQUINOL-CYTOCHROME C REDUCTASE 7.2 KDA PROTEIN-
A,
K [auth N]
MITOCHONDRIAL UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN I -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I,
S [auth V]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
I,
S [auth V]
IPR014349Rieske iron-sulphur proteinFamily
I,
S [auth V]
IPR011070Globular protein, non-globular alpha/beta subunitHomologous Superfamily
I,
S [auth V]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
I,
S [auth V]
IPR015248Ubiquinol-cytochrome c reductase iron-sulphur subunit, N-terminalDomain
I,
S [auth V]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
I,
S [auth V]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
I,
S [auth V]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
I,
S [auth V]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
H,
R [auth U]
IPR003422Cytochrome b-c1 complex, subunit 6Family
H,
R [auth U]
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
H,
R [auth U]
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
G,
Q [auth T]
IPR004205Cytochrome b-c1 complex subunit 8Family
G,
Q [auth T]
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
F,
P [auth S]
IPR003197Cytochrome b-c1 complex subunit 7Family
F,
P [auth S]
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
E,
O [auth R]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
E,
O [auth R]
IPR014349Rieske iron-sulphur proteinFamily
E,
O [auth R]
IPR011070Globular protein, non-globular alpha/beta subunitHomologous Superfamily
E,
O [auth R]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
E,
O [auth R]
IPR015248Ubiquinol-cytochrome c reductase iron-sulphur subunit, N-terminalDomain
E,
O [auth R]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
E,
O [auth R]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
E,
O [auth R]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
E,
O [auth R]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
C,
M [auth P]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
C,
M [auth P]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
C,
M [auth P]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
C,
M [auth P]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
C,
M [auth P]
IPR005798Cytochrome b/b6, C-terminalDomain
C,
M [auth P]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
C,
M [auth P]
IPR030689Cytochrome bFamily
C,
M [auth P]
IPR005797Cytochrome b/b6, N-terminal domainDomain
B,
L [auth O]
IPR007863Peptidase M16, C-terminalDomain
B,
L [auth O]
IPR011765Peptidase M16, N-terminalDomain
B,
L [auth O]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
B,
L [auth O]
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
J,
T [auth W]
IPR008027Cytochrome b-c1 complex subunit 9Family
J,
T [auth W]
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily
A,
K [auth N]
IPR007863Peptidase M16, C-terminalDomain
A,
K [auth N]
IPR011765Peptidase M16, N-terminalDomain
A,
K [auth N]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A,
K [auth N]
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily