3GR1 | pdb_00003gr1

Periplasmic domain of the T3SS inner membrane protein PrgH from S.typhimurium (fragment 170-392)

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	Ras	e3gr1H1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Ras	ECOD (develop294)
G	Ras	e3gr1G1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Ras	ECOD (develop294)
F	Ras	e3gr1F1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Ras	ECOD (develop294)
E	Ras	e3gr1E1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Ras	ECOD (develop294)
D	Ras	e3gr1D1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Ras	ECOD (develop294)
C	Ras	e3gr1C1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Ras	ECOD (develop294)
B	Ras	e3gr1B1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Ras	ECOD (develop294)
A	PrgH	e3gr1A1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: PrgH	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	3.30.70.1780	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
H	3.30.300.170	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
H	3.30.70.1770	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
G	3.30.70.1780	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
G	3.30.300.170	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
G	3.30.70.1770	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
F	3.30.70.1780	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
F	3.30.300.170	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
F	3.30.70.1770	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
E	3.30.70.1780	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
E	3.30.300.170	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
E	3.30.70.1770	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
D	3.30.70.1780	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
D	3.30.300.170	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
D	3.30.70.1770	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
C	3.30.70.1780	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
C	3.30.300.170	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
C	3.30.70.1770	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
B	3.30.70.1780	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
B	3.30.300.170	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
B	3.30.70.1770	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
A	3.30.70.1780	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
A	3.30.300.170	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
A	3.30.70.1770	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF09480	Type III secretion system protein PrgH-EprH (PrgH) (PrgH)	Type III secretion system protein PrgH-EprH (PrgH)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Protein prgH	-	-	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR019029	Type III secretion system, PrgH/EprH-like	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR013387	Type III secretion system, PrgH/EprH	Family