3HP8 | pdb_00003hp8

Crystal structure of a designed Cyanovirin-N homolog lectin; LKAMG, bound to sucrose

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	NUDIX	e3hp8B1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: NUDIX	ECOD (develop294)
A	NUDIX	e3hp8A1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: NUDIX	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.30.60.10	Mainly Beta	Roll	HIV-inactivating Protein, Cyanovirin-n	Cyanovirin-N	CATH (4.3.0)
A	2.30.60.10	Mainly Beta	Roll	HIV-inactivating Protein, Cyanovirin-n	Cyanovirin-N	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF08881	CVNH domain (CVNH)	CVNH domain	CyanoVirin-N Homology domains are found in the sugar-binding antiviral protein cyanovirin-N (CVN) as well as filamentous ascomycetes and in the fern Ceratopteris richardii.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Cyanovirin-N-like protein	binding carbohydrate binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR036673	Cyanovirin-N superfamily	Homologous Superfamily
A, B	IPR011058	Cyanovirin-N	Domain
A, B	IPR036673	Cyanovirin-N superfamily	Homologous Superfamily
A, B	IPR011058	Cyanovirin-N	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.