3K8E
Crystal structure of E. coli lipopolysaccharide specific CMP-KDO synthetase
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | d3k8ec_ | Alpha and beta proteins (a/b) | Nucleotide-diphospho-sugar transferases | Nucleotide-diphospho-sugar transferases | Cytidylytransferase | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
B [auth D] | d3k8ed_ | Alpha and beta proteins (a/b) | Nucleotide-diphospho-sugar transferases | Nucleotide-diphospho-sugar transferases | Cytidylytransferase | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
C [auth A] | d3k8ea_ | Alpha and beta proteins (a/b) | Nucleotide-diphospho-sugar transferases | Nucleotide-diphospho-sugar transferases | Cytidylytransferase | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
D [auth B] | d3k8eb_ | Alpha and beta proteins (a/b) | Nucleotide-diphospho-sugar transferases | Nucleotide-diphospho-sugar transferases | Cytidylytransferase | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth C] | SCOP2B Superfamily | Nucleotide-diphospho-sugar transferases | 8035764 | 3000077 | SCOP2B (2022-06-29) |
B [auth D] | SCOP2B Superfamily | Nucleotide-diphospho-sugar transferases | 8035764 | 3000077 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | Nucleotide-diphospho-sugar transferases | 8035764 | 3000077 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Nucleotide-diphospho-sugar transferases | 8035764 | 3000077 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | CTP_transf_3 | e3k8eC1 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: CTP_transf_3 | ECOD (1.6) |
B [auth D] | CTP_transf_3 | e3k8eD1 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: CTP_transf_3 | ECOD (1.6) |
C [auth A] | CTP_transf_3 | e3k8eA1 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: CTP_transf_3 | ECOD (1.6) |
D [auth B] | CTP_transf_3 | e3k8eB1 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: CTP_transf_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth C] | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (4.3.0) |
B [auth D] | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (4.3.0) |
C [auth A] | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (4.3.0) |
D [auth B] | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], B [auth D], C [auth A], D [auth B] | PF02348 | Cytidylyltransferase (CTP_transf_3) | Cytidylyltransferase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C], B [auth D], C [auth A], D [auth B] | IPR004528 | 3-deoxy-D-manno-octulosonate cytidylyltransferase | Family |
A [auth C], B [auth D], C [auth A], D [auth B] | IPR029044 | Nucleotide-diphospho-sugar transferases | Homologous Superfamily |
A [auth C], B [auth D], C [auth A], D [auth B] | IPR003329 | Acylneuraminate cytidylyltransferase | Family |