3KCU | pdb_00003kcu

Structure of formate channel

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	adh_short	e3kcuA1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (develop294)
B	adh_short	e3kcuB1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (develop294)
C	adh_short	e3kcuC1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (develop294)
D	adh_short	e3kcuD1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (develop294)
E	HCV_NS2	e3kcuE1	A: alpha bundles	X: Tautomerase/MIF-like	H: Tautomerase/MIF	T: Catalytic domain of hepatitis C virus NS2-3 protease	F: HCV_NS2	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.1080.10	Mainly Alpha	Up-down Bundle	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein.	CATH (4.3.0)
B	1.20.1080.10	Mainly Alpha	Up-down Bundle	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein.	CATH (4.3.0)
C	1.20.1080.10	Mainly Alpha	Up-down Bundle	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein.	CATH (4.3.0)
D	1.20.1080.10	Mainly Alpha	Up-down Bundle	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein.	CATH (4.3.0)
E	1.20.1080.10	Mainly Alpha	Up-down Bundle	Glycerol uptake facilitator protein	Glycerol uptake facilitator protein.	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E	Probable formate transporter 1	formate transmembrane transporter activity transporter activity monocarboxylic acid transmembrane transporter activity carboxylic acid transmembrane transporter activity transmembrane transporter activity identical protein binding protein binding binding	-	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR023271	Aquaporin-like	Homologous Superfamily
A, B, C, D, E	IPR024002	Formate/nitrite transporter, conserved site	Conserved Site
A, B, C, D, E	IPR000292	Formate/nitrite transporter	Family
A, B, C, D, E	IPR023999	Formate transporter FocA	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D, E	OPM	Transmembrane	Alpha-helical polytopic	Major Intrinsic Protein (MIP)/FNT superfamily	Formate/Nitrite transporter (FNT) family

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D, E	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B, C, D, E	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Channels : Formate/Nitrite Transporter (FNT) Family	FocA, pentameric aquaporin-like formate transporter

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.