3LHP | pdb_00003lhp

Crystal structure of HIV epitope-scaffold 4E10_D0_1ISEA_004_N 4E10 Fv complex

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
IMGT Antibody Annotation
SAbDab Antibody Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D [auth M]	d3lhpm1	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	automated matches	automated matches	(Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
D [auth M]	d3lhpm2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
C [auth L]	d3lhpl1	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	automated matches	automated matches	(Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
C [auth L]	d3lhpl2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
B [auth I]	d3lhpi_	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	automated matches	automated matches	(Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A [auth H]	d3lhph1	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	automated matches	automated matches	(Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A [auth H]	d3lhph2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F [auth T]		e3lhpT1	A: gp11/gp12 receptor-binding domain	X: gp11/gp12 receptor-binding domain	H: gp11/gp12 receptor-binding domain	T: VHP	F:	ECOD (20:10:01)
E [auth S]		e3lhpS1	A: PBZ domain	X: PBZ domain	H: PBZ domain	T: ADAM_CR	F:	ECOD (20:10:01)
D [auth M]		e3lhpM1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T:	F:	ECOD (20:10:01)
C [auth L]		e3lhpL1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T:	F:	ECOD (20:10:01)
B [auth I]		e3lhpI1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T:	F:	ECOD (20:10:01)
A [auth H]		e3lhpH1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T:	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F [auth T]	1.10.132.20	Mainly Alpha	Orthogonal Bundle	Topoisomerase I	Chain A, domain 4	CATH (4.3.0)
E [auth S]	1.10.132.20	Mainly Alpha	Orthogonal Bundle	Topoisomerase I	Chain A, domain 4	CATH (4.3.0)
D [auth M]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
C [auth L]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
B [auth I]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
A [auth H]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

Chain	Protein Name	Description	Organism Name	Gene Allele Name(s)	Domain Name(s)	Receptor Type	Receptor Description	Provenance Source
C [auth L], D [auth M]	(MPER) [HIV-1], neutralizing	V-KAPPA	Homo sapiens (human)	IGKV3-2001, IGKJ101	V-DOMAIN V-KAPPA	IG	FV-HEAVY_KAPPA	IMGT (202609-0)
A [auth H], B [auth I]	(MPER) [HIV-1], neutralizing	VH	Homo sapiens (human)	IGHV1-6910, IGHJ101	V-DOMAIN VH	IG	FV-HEAVY_KAPPA	IMGT (202609-0)

SAbDab Antibody Annotation SAbDab Database Homepage

Chain	Chain Class	Chain Subclass	Chain Type	Antigen Name(s)	Provenance Source
C [auth L], D [auth M]	Light Chain	IGKV3	Kappa	4e10_d0_1isea_004_n (t93)	SAbDab (2026-03-13)
A [auth H], B [auth I]	Heavy Chain	IGHV1	-	4e10_d0_1isea_004_n (t93)	SAbDab (2026-03-13)

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.