3RWN
Atomic structure of bacteriophage sf6 tail needle knob
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | TNF-like | 8091691 | 3000061 | SCOP2B (2022-06-29) |
| B | SCOP2 Family | Sf6-type phage tail needle knob-like | 8045727 | 4004643 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | TNF-like | 8091691 | 3000061 | SCOP2 (2022-06-29) |
| C | SCOP2B Superfamily | TNF-like | 8091691 | 3000061 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Phage_tail_NK | e3rwnA1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: Phage_tail_NK | ECOD (1.6) |
| B | Phage_tail_NK | e3rwnB1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: Phage_tail_NK | ECOD (1.6) |
| C | Phage_tail_NK | e3rwnC1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: Phage_tail_NK | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.120.1120 | Mainly Beta | Sandwich | Jelly Rolls | Sf6-type phage tail needle knob | CATH (4.3.0) |
| B | 2.60.120.1120 | Mainly Beta | Sandwich | Jelly Rolls | Sf6-type phage tail needle knob | CATH (4.3.0) |
| C | 2.60.120.1120 | Mainly Beta | Sandwich | Jelly Rolls | Sf6-type phage tail needle knob | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF16532 | Sf6-type phage tail needle knob or tip of some Caudovirales (Phage_tail_NK) | Sf6-type phage tail needle knob or tip of some Caudovirales | Phage_tail_NK is the globular tip protein of some tailed bacteriophages. Tailed bacteriophage virions deliver DNA to susceptible cells after adsorbing to specific receptors on the surface of the bacteria. In the Gram-negative bacteria these receptors ... | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR032395 | Sf6-type phage tail needle knob | Domain | |
| IPR038681 | Sf6-type phage tail needle knob superfamily | Homologous Superfamily |
