3SDR | pdb_00003sdr

Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALipase_3e3sdrA3 A: alpha bundlesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: Lipase_3ECOD (develop294)
APectate_lyase_2e3sdrA5 A: alpha bundlesX: Four-helical up-and-down bundleH: Thymidylate synthase/dCMP hydroxymethylaseT: Thymidylate synthase/dCMP hydroxymethylaseF: Pectate_lyase_2ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.50.10.130 Mainly Alpha Alpha/alpha barrel Glycosyltransferase Terpene synthase, N-terminal domainCATH (4.3.0)
A1.50.10.160 Mainly Alpha Alpha/alpha barrel Glycosyltransferase CATH (4.3.0)
A1.10.600.10 Mainly Alpha Orthogonal Bundle Farnesyl Diphosphate Synthase Farnesyl Diphosphate SynthaseCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Alpha-bisabolene synthase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR005630Terpene synthase, metal-binding domainDomain
IPR008949Isoprenoid synthase domain superfamilyHomologous Superfamily
IPR036965Terpene synthase, N-terminal domain superfamilyHomologous Superfamily
IPR034741Terpene cyclase-like 1, C-terminal domainDomain
IPR044814Terpene cyclases, class 1, plantFamily
IPR001906Terpene synthase, N-terminal domainDomain
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidHomologous Superfamily
IPR050148Terpene synthase-likeFamily