3SZS | pdb_00003szs

Crystal structure analysis of hellethionin D

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
G	d3szsg_	Small proteins	Crambin-like	Crambin-like	Crambin-like	Hellethionin D	(Helleborus purpurascens ) [TaxId: 171899 ],	SCOPe (2.08)
F	d3szsf_	Small proteins	Crambin-like	Crambin-like	Crambin-like	Hellethionin D	(Helleborus purpurascens ) [TaxId: 171899 ],	SCOPe (2.08)
E	d3szse_	Small proteins	Crambin-like	Crambin-like	Crambin-like	Hellethionin D	(Helleborus purpurascens ) [TaxId: 171899 ],	SCOPe (2.08)
D	d3szsd_	Small proteins	Crambin-like	Crambin-like	Crambin-like	Hellethionin D	(Helleborus purpurascens ) [TaxId: 171899 ],	SCOPe (2.08)
C	d3szsc_	Small proteins	Crambin-like	Crambin-like	Crambin-like	Hellethionin D	(Helleborus purpurascens ) [TaxId: 171899 ],	SCOPe (2.08)
B	d3szsb_	Small proteins	Crambin-like	Crambin-like	Crambin-like	Hellethionin D	(Helleborus purpurascens ) [TaxId: 171899 ],	SCOPe (2.08)
A	d3szsa_	Small proteins	Crambin-like	Crambin-like	Crambin-like	Hellethionin D	(Helleborus purpurascens ) [TaxId: 171899 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
G	SCOP2B Superfamily	Crambin-like	8033210	3000743	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Crambin-like	8033210	3000743	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Crambin-like	8033210	3000743	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Crambin-like	8033210	3000743	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Crambin-like	8033210	3000743	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Crambin-like	8033210	3000743	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Crambin-like	8033210	3000743	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
G	ABC_tran	e3szsG1	A: a/b three-layered sandwiches	X: beta-Grasp	H: HTH	T: winged helix domain	F: ABC_tran	ECOD (v294.1)
F	ABC_tran	e3szsF1	A: a/b three-layered sandwiches	X: beta-Grasp	H: HTH	T: winged helix domain	F: ABC_tran	ECOD (v294.1)
E	ABC_tran	e3szsE1	A: a/b three-layered sandwiches	X: beta-Grasp	H: HTH	T: winged helix domain	F: ABC_tran	ECOD (v294.1)
D	ABC_tran	e3szsD1	A: a/b three-layered sandwiches	X: beta-Grasp	H: HTH	T: winged helix domain	F: ABC_tran	ECOD (v294.1)
C	ABC_tran	e3szsC1	A: a/b three-layered sandwiches	X: beta-Grasp	H: HTH	T: winged helix domain	F: ABC_tran	ECOD (v294.1)
B	ABC_tran	e3szsB1	A: a/b three-layered sandwiches	X: beta-Grasp	H: HTH	T: winged helix domain	F: ABC_tran	ECOD (v294.1)
A	Fapy_DNA_glyco	e3szsA1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: SH3	T: SH3	F: Fapy_DNA_glyco	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
G	3.30.1350.10	Alpha Beta	2-Layer Sandwich	Crambin	Thionin-like	CATH (4.3.0)
F	3.30.1350.10	Alpha Beta	2-Layer Sandwich	Crambin	Thionin-like	CATH (4.3.0)
E	3.30.1350.10	Alpha Beta	2-Layer Sandwich	Crambin	Thionin-like	CATH (4.3.0)
D	3.30.1350.10	Alpha Beta	2-Layer Sandwich	Crambin	Thionin-like	CATH (4.3.0)
C	3.30.1350.10	Alpha Beta	2-Layer Sandwich	Crambin	Thionin-like	CATH (4.3.0)
B	3.30.1350.10	Alpha Beta	2-Layer Sandwich	Crambin	Thionin-like	CATH (4.3.0)
A	3.30.1350.10	Alpha Beta	2-Layer Sandwich	Crambin	Thionin-like	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G	Hellethionin-D	toxin activity	biological process involved in interspecies interaction between organisms symbiont-mediated cytolysis of host cell disruption of cell in another organism cytolysis biological process involved in interaction with host biological process involved in symbiotic interaction cytolysis in another organism cellular process disruption of anatomical structure in another organism symbiont-mediated killing of host cell killing of cells of another organism cell killing defense response to fungus response to stimulus biological process involved in interspecies interaction between organisms symbiont-mediated cytolysis of host cell disruption of cell in another organism cytolysis biological process involved in interaction with host biological process involved in symbiotic interaction cytolysis in another organism cellular process disruption of anatomical structure in another organism symbiont-mediated killing of host cell killing of cells of another organism cell killing defense response to fungus response to stimulus response to other organism defense response response to stress response to external stimulus response to fungus response to external biotic stimulus response to biotic stimulus defense response to Gram-positive bacterium defense response to bacterium response to bacterium	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G	IPR036391	Thionin-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G	IPR001010	Thionin	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.