3UX4
Crystal structure of the urea channel from the human gastric pathogen Helicobacter pylori
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | AmiS/UreI transporter-like | 8050075 | 4006760 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Succinate-acetate permease SatP-like | 8095817 | 3002706 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Succinate-acetate permease SatP-like | 8095817 | 3002706 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Succinate-acetate permease SatP-like | 8095817 | 3002706 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | AmiS_UreI | e3ux4A1 | A: alpha complex topology | X: Acid-activated urea channel (From Topology) | H: Acid-activated urea channel (From Topology) | T: Acid-activated urea channel | F: AmiS_UreI | ECOD (1.6) |
C | AmiS_UreI | e3ux4C1 | A: alpha complex topology | X: Acid-activated urea channel (From Topology) | H: Acid-activated urea channel (From Topology) | T: Acid-activated urea channel | F: AmiS_UreI | ECOD (1.6) |
B | AmiS_UreI | e3ux4B1 | A: alpha complex topology | X: Acid-activated urea channel (From Topology) | H: Acid-activated urea channel (From Topology) | T: Acid-activated urea channel | F: AmiS_UreI | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.25.40.600 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | AmiS/UreI transporter | CATH (4.3.0) |
C | 1.25.40.600 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | AmiS/UreI transporter | CATH (4.3.0) |
B | 1.25.40.600 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | AmiS/UreI transporter | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02293 | AmiS/UreI family transporter (AmiS_UreI) | AmiS/UreI family transporter | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Acid-activated urea channel | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003211 | AmiS/UreI transporter | Family | |
IPR038523 | AmiS/UreI transporter superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Urea/amide channel |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Channels: Urea Transporters | UreI proton-gated inner membrane urea channel |