4BE3 | pdb_00004be3

crystal structure of the exolytic PL7 alginate lyase AlyA5 from Zobellia galactanivorans

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be4be3B1 A: gp11/gp12 receptor-binding domainX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: Tae4F:ECOD (20:10:01)
Ae4be3A1 A: gp11/gp12 receptor-binding domainX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: Tae4F:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.120.200 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
A2.60.120.200 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF08787Alginate lyase (Alginate_lyase2)Alginate lyaseAlginate lyases are enzymes that degrade the linear polysaccharide alignate. They cleave the glycosidic linkage of alignate through a beta-elimination reaction. This family forms an all beta fold and is different to all alpha fold of Pf ...Alginate lyases are enzymes that degrade the linear polysaccharide alignate. They cleave the glycosidic linkage of alignate through a beta-elimination reaction. This family forms an all beta fold and is different to all alpha fold of Pfam:PF05426.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
ALGINATE LYASE, FAMILY PL7 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR013320Concanavalin A-like lectin/glucanase domain superfamilyHomologous Superfamily
A, B
IPR014895Alginate lyase 2Domain