4BML | pdb_00004bml

C-alpha backbone trace of major capsid protein gp39 found in marine virus Syn5.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
De4bmlD1 A: HTHX: Toll/Interleukin receptor TIR domainH: Toll/Interleukin receptor TIR domainT: Cyclin_NF:ECOD (20:10:01)
Ge4bmlG1 A: HTHX: Toll/Interleukin receptor TIR domainH: Toll/Interleukin receptor TIR domainT: Cyclin_NF:ECOD (20:10:01)
Fe4bmlF1 A: HTHX: Toll/Interleukin receptor TIR domainH: Toll/Interleukin receptor TIR domainT: Cyclin_NF:ECOD (20:10:01)
Ee4bmlE1 A: Outer membrane meander beta-barrelsX: PorinsH: PorinT: HemagglutininF:ECOD (20:10:01)
Ce4bmlC1 A: HTHX: Toll/Interleukin receptor TIR domainH: Toll/Interleukin receptor TIR domainT: Cyclin_NF:ECOD (20:10:01)
Be4bmlB1 A: HTHX: Toll/Interleukin receptor TIR domainH: Toll/Interleukin receptor TIR domainT: Cyclin_NF:ECOD (20:10:01)
Ae4bmlA1 A: HTHX: Toll/Interleukin receptor TIR domainH: Toll/Interleukin receptor TIR domainT: Cyclin_NF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF21703Major capsid protein (Gp10A-like)Major capsid proteinThis protein family includes Major capsid protein from Bacteriophage T7 (Gp10A) and similar proteins from tailed bacteriophages and bacterial prophages. Gp10A subunits adopt an HK97-like conformation to form the viral shell [2]. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR049301Capsid Gp10A/Gp10B-like domainDomain