Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4dpga1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad4dpga2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd4dpgb1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd4dpgb2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd4dpgd1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd4dpgd2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ed4dpge1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ed4dpge2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Fd4dpgf1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Fd4dpgf2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd4dpgg1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd4dpgg2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd4dpgh1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd4dpgh2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd4dpgc1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd4dpgc2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ISCOP2B SuperfamilyAIMP2 lysyl-tRNA synthetase binding domain-like 8092962 3002650 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyAIMP2 lysyl-tRNA synthetase binding domain-like 8092962 3002650 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyAIMP2 lysyl-tRNA synthetase binding domain-like 8092962 3002650 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyAIMP2 lysyl-tRNA synthetase binding domain-like 8092962 3002650 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AtRNA_anti-codone4dpgA4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
AtRNA-synt_2e4dpgA3 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
BtRNA_anti-codone4dpgB4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
BtRNA-synt_2e4dpgB3 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
DtRNA_anti-codone4dpgD4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
DtRNA-synt_2e4dpgD3 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
EtRNA_anti-codone4dpgE4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
EtRNA-synt_2e4dpgE3 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
FtRNA_anti-codone4dpgF4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
FtRNA-synt_2e4dpgF3 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
GtRNA_anti-codone4dpgG4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
GtRNA-synt_2e4dpgG3 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
HtRNA_anti-codone4dpgH4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
HtRNA-synt_2e4dpgH3 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
CtRNA_anti-codone4dpgC4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
CtRNA-synt_2e4dpgC3 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
A3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
B2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
B3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
D2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
D3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
E2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
E3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
F2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
F3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
G2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
G3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
H2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
H3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
C2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
C3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00152tRNA synthetases class II (D, K and N) (tRNA-synt_2)tRNA synthetases class II (D, K and N)- Domain
A, B, C, D, E
PF01336OB-fold nucleic acid binding domain (tRNA_anti-codon)OB-fold nucleic acid binding domainThis family contains OB-fold domains that bind to nucleic acids [4]. The family includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl -tRNA synthetases (See Pfam:PF00152). Aminoacyl-tRNA synthetases catalyse the addition of an a ...This family contains OB-fold domains that bind to nucleic acids [4]. The family includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl -tRNA synthetases (See Pfam:PF00152). Aminoacyl-tRNA synthetases catalyse the addition of an amino acid to the appropriate tRNA molecule EC:6.1.1.-. This family also includes part of RecG helicase involved in DNA repair. Replication factor A is a hetero-trimeric complex, that contains a subunit in this family [2,3]. This domain is also found at the C-terminus of bacterial DNA polymerase III alpha chain.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I, J, K, L
Aminoacyl tRNA synthase complex-interacting multifunctional protein 2
A, B, C, D, E
Lysine--tRNA ligase