4DRJ
o-crystal structure of the PPIase domain of FKBP52, Rapamycin and the FRB fragment of mTOR
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4drja_ | Alpha and beta proteins (a+b) | FKBP-like | FKBP-like | FKBP immunophilin/proline isomerase | FKBP52, N-terminal domains | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d4drjb1 | All alpha proteins | Four-helical up-and-down bundle | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | mTOR FKBP12–rapamycin-binding (FRB) domain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d4drjb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FKBP_C | e4drjA1 | A: a+b two layers | X: FKBP-like | H: FKBP-like | T: FKBP-like | F: FKBP_C | ECOD (1.6) |
B | FRB_dom | e4drjB1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) (From Topology) | T: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | F: FRB_dom | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.50.40 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
B | 1.20.120.150 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | FKBP12-rapamycin binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00254 | FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C) | FKBP-type peptidyl-prolyl cis-trans isomerase | - | Domain | |
PF08771 | FKBP12-rapamycin binding domain (FRB_dom) | FKBP12-rapamycin binding domain | The macrolide antibiotic rapamycin and the cytosol protein FKBP12 can form a complex which specifically inhibits the TORC1 complex, leading to growth arrest. The FKBP12-rapamycin complex interferes with TORC1 function by binding to the FKBP12-rapa ... | Domain |