Crystal structure at 2.1 A of the S-component for biotin from an ECF-type ABC transporter
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | Gx transporter-like | 8054033 | 3002268 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Gx transporter-like | 8054033 | 3002268 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | BioY-like | 8050682 | 4006999 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Gx transporter-like | 8054033 | 3002268 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | e4dveC1 | A: cradle loop barrel | X: RIFT-related | H: acid protease | T: PPV_E1_C | F: | ECOD (20:10:01) | |
| B | e4dveB1 | A: cradle loop barrel | X: RIFT-related | H: acid protease | T: PPV_E1_C | F: | ECOD (20:10:01) | |
| A | e4dveA1 | A: cradle loop barrel | X: RIFT-related | H: acid protease | T: PPV_E1_C | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 1.10.1760.20 | Mainly Alpha | Orthogonal Bundle | Arp2/3 complex 21 kDa subunit ARPC3 | CATH (4.3.0) | |
| B | 1.10.1760.20 | Mainly Alpha | Orthogonal Bundle | Arp2/3 complex 21 kDa subunit ARPC3 | CATH (4.3.0) | |
| A | 1.10.1760.20 | Mainly Alpha | Orthogonal Bundle | Arp2/3 complex 21 kDa subunit ARPC3 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Biotin transporter BioY | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR003784 | BioY protein | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Energy-coupling factor transporters | S component of vitamin uptake transporter |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Energy-Coupling Factor (ECF) Transporters | BioY, S component of the Biotin Transporter |
