4E8D | pdb_00004e8d

Crystal structure of streptococcal beta-galactosidase


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae4e8dA6 A: Subtilisin-likeX: Subtilisin-likeH: Subtilisin-likeT: Peptidase_M49F:ECOD (20:10:01)
Be4e8dB3 A: Fusion glycoprotein F2X: Fusion glycoprotein F2H: Fusion glycoprotein F2T: BetaGal_gal-bdF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
B3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
B2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF21317Beta-galactosidase, first all-beta domain (BetaGal_ABD_1)Beta-galactosidase, first all-beta domainBeta-galactosidases belong to glycosyl hydrolase 35 family (GH35) which catalyse the cleaveage of beta-linked terminal galactosyl residues from gangliosides, glycoproteins, and glycosaminoglycans. These proteins consist of a catalytic TIM-barrel and ...Beta-galactosidases belong to glycosyl hydrolase 35 family (GH35) which catalyse the cleaveage of beta-linked terminal galactosyl residues from gangliosides, glycoproteins, and glycosaminoglycans. These proteins consist of a catalytic TIM-barrel and two all-beta domains (ABD1 and ABD2) [1-5]. This entry represents the first all-beta domain ABD1. ABD2 is represented in Pfam:PF13364.
Domain
A, B
PF01301Glycosyl hydrolases family 35 (Glyco_hydro_35)Glycosyl hydrolases family 35Domain
A, B
PF21467Beta-galactosidase, galactose-binding domain (BetaGal_gal-bd)Beta-galactosidase, galactose-binding domainBeta-galactosidase belongs to Glycoside hydrolase family 35 [1-5]. This entry represents the galactose-binding domain. Domain