High resolution structure of truncated bacteriocin syringacin M from Pseudomonas syringae pv. tomato DC3000
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | PA14 | e4fzlA1 | A: alpha bundles | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: PA14 | ECOD (develop294) |
| B | ALO | e4fzlB2 | A: alpha bundles | X: DEATH domain | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: ALO | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.10.150.790 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
| A | 3.30.450.400 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | Colicin M, catalytic domain | CATH (4.3.0) |
| B | 1.10.150.790 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
| B | 3.30.450.400 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | Colicin M, catalytic domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF14859 | Colicin M (Colicin_M) | Colicin M | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Bacteriocin | - |
