4HDM
Crystal Structure of ArsAB in Complex with p-cresol
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d4hdmb_ | Alpha and beta proteins (a/b) | Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) | Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) | automated matches | automated matches | (Sporomusa ovata ) [TaxId: 2378 ], | SCOPe (2.08) |
A | d4hdma_ | Alpha and beta proteins (a/b) | Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) | Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) | automated matches | automated matches | (Sporomusa ovata ) [TaxId: 2378 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2 Family | CobT-like | 8084418 | 4000405 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | CobT-like | 8084419 | 3000212 | SCOP2 (2022-06-29) |
A | SCOP2 Family | CobT-like | 8084416 | 4000405 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | CobT-like | 8084417 | 3000212 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | DBI_PRT | e4hdmB1 | A: a/b three-layered sandwiches | X: Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) (From Topology) | H: Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) (From Topology) | T: Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) | F: DBI_PRT | ECOD (1.6) |
A | DBI_PRT | e4hdmA1 | A: a/b three-layered sandwiches | X: Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) (From Topology) | H: Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) (From Topology) | T: Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) | F: DBI_PRT | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.10.1610.10 | Mainly Alpha | Orthogonal Bundle | 5,6-Dimethylbenzimidazole Phosphoribosyltransferase | Chain: A | CATH (4.3.0) |
B | 3.40.50.10210 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (CobT), large domain | CATH (4.3.0) |
A | 1.10.1610.10 | Mainly Alpha | Orthogonal Bundle | 5,6-Dimethylbenzimidazole Phosphoribosyltransferase | Chain: A | CATH (4.3.0) |
A | 3.40.50.10210 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (CobT), large domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02277 | Phosphoribosyltransferase (DBI_PRT) | Phosphoribosyltransferase | This family of proteins represent the nicotinate-nucleotide- dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) enzymes involved in dimethylbenzimidazole synthesis. This function is essential to de novo cobalamin (vitamin B12) production in ... | Domain | |
PF02277 | Phosphoribosyltransferase (DBI_PRT) | Phosphoribosyltransferase | This family of proteins represent the nicotinate-nucleotide- dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) enzymes involved in dimethylbenzimidazole synthesis. This function is essential to de novo cobalamin (vitamin B12) production in ... | Domain |