4I0U | pdb_00004i0u

Improved structure of Thermotoga maritima CorA at 2.7 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
J	d4i0uj1	Alpha and beta proteins (a+b)	CorA soluble domain-like	CorA soluble domain-like	CorA soluble domain-like	automated matches	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
J	d4i0uj2	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
I	d4i0ui1	Alpha and beta proteins (a+b)	CorA soluble domain-like	CorA soluble domain-like	CorA soluble domain-like	automated matches	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
I	d4i0ui2	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
H	d4i0uh1	Alpha and beta proteins (a+b)	CorA soluble domain-like	CorA soluble domain-like	CorA soluble domain-like	automated matches	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
H	d4i0uh2	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
G	d4i0ug1	Alpha and beta proteins (a+b)	CorA soluble domain-like	CorA soluble domain-like	CorA soluble domain-like	automated matches	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
G	d4i0ug2	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
F	d4i0uf1	Alpha and beta proteins (a+b)	CorA soluble domain-like	CorA soluble domain-like	CorA soluble domain-like	automated matches	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
F	d4i0uf2	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
E	d4i0ue1	Alpha and beta proteins (a+b)	CorA soluble domain-like	CorA soluble domain-like	CorA soluble domain-like	automated matches	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
E	d4i0ue2	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
D	d4i0ud1	Alpha and beta proteins (a+b)	CorA soluble domain-like	CorA soluble domain-like	CorA soluble domain-like	automated matches	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
D	d4i0ud2	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
C	d4i0uc1	Alpha and beta proteins (a+b)	CorA soluble domain-like	CorA soluble domain-like	CorA soluble domain-like	automated matches	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
C	d4i0uc2	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
B	d4i0ub1	Alpha and beta proteins (a+b)	CorA soluble domain-like	CorA soluble domain-like	CorA soluble domain-like	automated matches	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
B	d4i0ub2	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
A	d4i0ua1	Alpha and beta proteins (a+b)	CorA soluble domain-like	CorA soluble domain-like	CorA soluble domain-like	automated matches	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
A	d4i0ua2	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA, transmembrane region	Magnesium transport protein CorA	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J	SCOP2B Superfamily	CorA soluble domain-like	8037836	3000209	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Magnesium transport protein CorA, transmembrane region	8042853	3000358	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	CorA soluble domain-like	8037836	3000209	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Magnesium transport protein CorA, transmembrane region	8042853	3000358	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Magnesium transport protein CorA, transmembrane region	8042853	3000358	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	CorA soluble domain-like	8037836	3000209	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Magnesium transport protein CorA, transmembrane region	8042853	3000358	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	CorA soluble domain-like	8037836	3000209	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Magnesium transport protein CorA, transmembrane region	8042853	3000358	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	CorA soluble domain-like	8037836	3000209	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Magnesium transport protein CorA, transmembrane region	8042853	3000358	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	CorA soluble domain-like	8037836	3000209	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	CorA soluble domain-like	8037836	3000209	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Magnesium transport protein CorA, transmembrane region	8042853	3000358	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Magnesium transport protein CorA, transmembrane region	8042853	3000358	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	CorA soluble domain-like	8037836	3000209	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	CorA soluble domain-like	8037836	3000209	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Magnesium transport protein CorA, transmembrane region	8042853	3000358	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Magnesium transport protein CorA, transmembrane region	8042853	3000358	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	CorA soluble domain-like	8037836	3000209	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J	OTU	e4i0uJ5	A: alpha bundles	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: OTU	ECOD (develop294)
I	OTU	e4i0uI5	A: alpha bundles	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: OTU	ECOD (develop294)
H	OTU	e4i0uH5	A: alpha bundles	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: OTU	ECOD (develop294)
G	OTU	e4i0uG5	A: alpha bundles	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: OTU	ECOD (develop294)
F	OTU	e4i0uF5	A: alpha bundles	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: OTU	ECOD (develop294)
E	OTU	e4i0uE5	A: alpha bundles	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: OTU	ECOD (develop294)
D	OTU	e4i0uD5	A: alpha bundles	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: OTU	ECOD (develop294)
C	OTU	e4i0uC5	A: alpha bundles	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: OTU	ECOD (develop294)
B	Pantoate_ligase	e4i0uB1	A: alpha bundles	X: Rossmann-like	H: Rossmann-related	T: NagB/RpiA/CoA transferase-like	F: Pantoate_ligase	ECOD (develop294)
A	OTU	e4i0uA5	A: alpha bundles	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: OTU	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
J	3.30.460.20	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
J	1.20.58.340	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
I	3.30.460.20	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
I	1.20.58.340	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
H	3.30.460.20	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
H	1.20.58.340	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
G	3.30.460.20	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
G	1.20.58.340	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
F	3.30.460.20	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
F	1.20.58.340	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
E	3.30.460.20	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
E	1.20.58.340	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
D	3.30.460.20	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
D	1.20.58.340	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
C	3.30.460.20	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
C	1.20.58.340	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
B	3.30.460.20	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
B	1.20.58.340	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
A	3.30.460.20	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
A	1.20.58.340	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	PF01544	CorA-like Mg2+ transporter protein (CorA)	CorA-like Mg2+ transporter protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	Magnesium transport protein CorA	cation binding transition metal ion binding ion binding binding metal ion binding cobalt ion binding small molecule binding magnesium ion binding cobalt ion transmembrane transporter activity monoatomic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transition metal ion transmembrane transporter activity metal ion transmembrane transporter activity cation binding transition metal ion binding ion binding binding metal ion binding cobalt ion binding small molecule binding magnesium ion binding cobalt ion transmembrane transporter activity monoatomic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transition metal ion transmembrane transporter activity metal ion transmembrane transporter activity transmembrane transporter activity magnesium ion transmembrane transporter activity identical protein binding protein binding	transport magnesium ion transport monoatomic ion transmembrane transport magnesium ion transmembrane transport establishment of localization metal ion transport monoatomic cation transmembrane transport transmembrane transport localization monoatomic ion transport cellular process monoatomic cation transport cellular component organization cellular component biogenesis transport magnesium ion transport monoatomic ion transmembrane transport magnesium ion transmembrane transport establishment of localization metal ion transport monoatomic cation transmembrane transport transmembrane transport localization monoatomic ion transport cellular process monoatomic cation transport cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly protein homooligomerization cellular component organization or biogenesis cobalt ion transport transition metal ion transport	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR002523	Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR045863	CorA, transmembrane region	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR004488	Magnesium/cobalt transport protein CorA	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR045861	CorA, cytoplasmic domain	Homologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	OPM	Transmembrane	Alpha-helical polytopic	CorA metal ion transporters (MIT)	CorA metal ion transporters (MIT)

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	MemProtMD	Annotated as membrane protein by MemProtMD

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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