4KFD
Crystal structure of Hansenula polymorpha copper amine oxidase-1 reduced by methylamine at pH 6.0
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | amine oxidase catalytic domain | 8043593 | 3001726 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Amine oxidase N-terminal region | 8043598 | 3000455 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Amine oxidase N-terminal region | 8043596 | 3000455 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Amine oxidase N-terminal region | 8043598 | 3000455 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | amine oxidase catalytic domain | 8043593 | 3001726 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Amine oxidase N-terminal region | 8043596 | 3000455 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Amine oxidase N-terminal region | 8043596 | 3000455 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | amine oxidase catalytic domain | 8043593 | 3001726 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Amine oxidase N-terminal region | 8043598 | 3000455 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Amine oxidase N-terminal region | 8043596 | 3000455 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | amine oxidase catalytic domain | 8043593 | 3001726 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Amine oxidase N-terminal region | 8043598 | 3000455 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | amine oxidase catalytic domain | 8043593 | 3001726 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Amine oxidase N-terminal region | 8043598 | 3000455 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Amine oxidase N-terminal region | 8043596 | 3000455 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | amine oxidase catalytic domain | 8043593 | 3001726 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Amine oxidase N-terminal region | 8043596 | 3000455 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Amine oxidase N-terminal region | 8043598 | 3000455 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Cu_amine_oxid | e4kfdA1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: Cu_amine_oxid | ECOD (1.6) |
A | Cu_amine_oxidN2 | e4kfdA2 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: Cu_amine_oxidN2 | ECOD (1.6) |
A | Cu_amine_oxidN3 | e4kfdA3 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: Cu_amine_oxidN3 | ECOD (1.6) |
B | Cu_amine_oxid | e4kfdB1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: Cu_amine_oxid | ECOD (1.6) |
B | Cu_amine_oxidN2 | e4kfdB2 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: Cu_amine_oxidN2 | ECOD (1.6) |
B | Cu_amine_oxidN3 | e4kfdB3 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: Cu_amine_oxidN3 | ECOD (1.6) |
C | Cu_amine_oxid | e4kfdC1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: Cu_amine_oxid | ECOD (1.6) |
C | Cu_amine_oxidN2 | e4kfdC2 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: Cu_amine_oxidN2 | ECOD (1.6) |
C | Cu_amine_oxidN3 | e4kfdC3 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: Cu_amine_oxidN3 | ECOD (1.6) |
D | Cu_amine_oxid | e4kfdD1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: Cu_amine_oxid | ECOD (1.6) |
D | Cu_amine_oxidN2 | e4kfdD2 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: Cu_amine_oxidN2 | ECOD (1.6) |
D | Cu_amine_oxidN3 | e4kfdD3 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: Cu_amine_oxidN3 | ECOD (1.6) |
E | Cu_amine_oxid | e4kfdE1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: Cu_amine_oxid | ECOD (1.6) |
E | Cu_amine_oxidN2 | e4kfdE2 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: Cu_amine_oxidN2 | ECOD (1.6) |
E | Cu_amine_oxidN3 | e4kfdE3 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: Cu_amine_oxidN3 | ECOD (1.6) |
F | Cu_amine_oxid | e4kfdF1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: Cu_amine_oxid | ECOD (1.6) |
F | Cu_amine_oxidN2 | e4kfdF2 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: Cu_amine_oxidN2 | ECOD (1.6) |
F | Cu_amine_oxidN3 | e4kfdF3 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: Cu_amine_oxidN3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02728 | Copper amine oxidase, N3 domain (Cu_amine_oxidN3) | Copper amine oxidase, N3 domain | This domain is the second or third structural domain in copper amine oxidases, it is known as the N3 domain. Its function is uncertain. The catalytic domain can be found in Pfam:PF01179. Copper amine oxidases are a ubiquitous and novel group of quino ... | Domain | |
PF02727 | Copper amine oxidase, N2 domain (Cu_amine_oxidN2) | Copper amine oxidase, N2 domain | This domain is the first or second structural domain in copper amine oxidases, it is known as the N2 domain. Its function is uncertain. The catalytic domain can be found in Pfam:PF01179. Copper amine oxidases are a ubiquitous and novel group of quino ... | Domain | |
PF01179 | Copper amine oxidase, enzyme domain (Cu_amine_oxid) | Copper amine oxidase, enzyme domain | Copper amine oxidases are a ubiquitous and novel group of quinoenzymes that catalyse the oxidative deamination of primary amines to the corresponding aldehydes, with concomitant reduction of molecular oxygen to hydrogen peroxide. The enzymes are dime ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000269 | Copper amine oxidase | Family | |
IPR036460 | Copper amine oxidase, catalytic domain superfamily | Homologous Superfamily | |
IPR015798 | Copper amine oxidase, catalytic domain | Domain | |
IPR049947 | Copper amine oxidase, copper-binding site | Conserved Site | |
IPR016182 | Copper amine oxidase, N-terminal | Homologous Superfamily | |
IPR049948 | Copper amine oxidase, TPQ-binding site | Conserved Site | |
IPR015802 | Copper amine oxidase, N3-terminal | Domain | |
IPR015800 | Copper amine oxidase, N2-terminal | Domain |