4LD8 | pdb_00004ld8

Crystal Structure of Dimeric Sudan Virus VP40


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4ld8a1 All beta proteins EV matrix protein EV matrix protein EV matrix protein automated matches SEBOV (Sudan ebolavirus ) [TaxId: 186540 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae4ld8A1 A: alpha bundlesX: PRTase-likeH: PRTase-likeT: PRTase-likeF:ECOD (develop294)
ATex_central_regione4ld8A3 A: alpha bundlesX: Fusion glycoprotein F2H: RIFT-relatedT: double psiF: Tex_central_regionECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.70.20.20 Mainly Beta Distorted Sandwich Topoisomerase I domain 3CATH (4.3.0)
A2.60.510.10 Mainly Beta Sandwich EV matrix protein fold EV matrix proteinCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Matrix protein VP40

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR043079EV matrix protein, N-terminalHomologous Superfamily
IPR008986EV matrix proteinFamily
IPR038057EV matrix domain superfamilyHomologous Superfamily
IPR035092EV matrix protein, C-terminalHomologous Superfamily