4PFP
Myosin VI motor domain in the Pi release state (with Pi) space group P21
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Myosin_N_2 | e4pfpA4 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Myosin_N_2 | ECOD (1.6) |
A | KOG0163_1 | e4pfpA1 | A: alpha bundles | X: Myosin VI lever arm (From Topology) | H: Myosin VI lever arm (From Topology) | T: Myosin VI lever arm | F: KOG0163_1 | ECOD (1.6) |
A | Myosin_head_1 | e4pfpA3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Myosin_head_1 | ECOD (1.6) |
B [auth C] | Myosin_N_2 | e4pfpC4 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Myosin_N_2 | ECOD (1.6) |
B [auth C] | KOG0163_1 | e4pfpC2 | A: alpha bundles | X: Myosin VI lever arm (From Topology) | H: Myosin VI lever arm (From Topology) | T: Myosin VI lever arm | F: KOG0163_1 | ECOD (1.6) |
B [auth C] | Myosin_head_1 | e4pfpC3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Myosin_head_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.30.360 | Mainly Beta | Roll | SH3 type barrels. | Myosin S1 fragment, N-terminal | CATH (4.3.0) |
A | 3.40.850.10 | Alpha Beta | 3-Layer(aba) Sandwich | Kinesin | Kinesin motor domain | CATH (4.3.0) |
A | 1.20.120.720 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Myosin VI head, motor domain, U50 subdomain | CATH (4.3.0) |
A | 1.20.58.530 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
B [auth C] | 2.30.30.360 | Mainly Beta | Roll | SH3 type barrels. | Myosin S1 fragment, N-terminal | CATH (4.3.0) |
B [auth C] | 3.40.850.10 | Alpha Beta | 3-Layer(aba) Sandwich | Kinesin | Kinesin motor domain | CATH (4.3.0) |
B [auth C] | 1.20.120.720 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Myosin VI head, motor domain, U50 subdomain | CATH (4.3.0) |
B [auth C] | 1.20.58.530 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C] | PF00063 | Myosin head (motor domain) (Myosin_head) | Myosin head (motor domain) | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C] | IPR036961 | Kinesin motor domain superfamily | Homologous Superfamily |
A, B [auth C] | IPR036114 | Class VI myosin, motor domain | Domain |
A, B [auth C] | IPR001609 | Myosin head, motor domain-like | Domain |
A, B [auth C] | IPR032412 | Myosin VI, cargo binding domain | Domain |
A, B [auth C] | IPR004009 | Myosin, N-terminal, SH3-like | Domain |
A, B [auth C] | IPR008989 | Myosin S1 fragment, N-terminal | Homologous Superfamily |
A, B [auth C] | IPR049016 | Myosin VI, lever arm | Domain |
A, B [auth C] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |