Crystal structure of plant photosystem I-LHCI super-complex at 2.8 angstrom resolution
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| H | SCOP2B Superfamily | Photosystem I reaction centre subunit VI | 8102526 | 3002733 | SCOP2B (2022-06-29) |
| X [auth h] | SCOP2 Family | Photosystem I reaction centre subunit VI | 8051254 | 4007266 | SCOP2 (2022-06-29) |
| X [auth h] | SCOP2 Superfamily | Photosystem I reaction centre subunit VI | 8102526 | 3002733 | SCOP2 (2022-06-29) |
| F | SCOP2B Superfamily | Subunit III of photosystem I reaction centre, PsaF | 8074446 | 3000813 | SCOP2B (2022-06-29) |
| V [auth f] | SCOP2B Superfamily | Subunit III of photosystem I reaction centre, PsaF | 8074446 | 3000813 | SCOP2B (2022-06-29) |
| E | SCOP2 Family | Photosystem I accessory protein E (PsaE) | 8074497 | 4001749 | SCOP2 (2022-06-29) |
| E | SCOP2 Superfamily | Electron transport accessory proteins | 8074498 | 3000325 | SCOP2 (2022-06-29) |
| U [auth e] | SCOP2B Superfamily | Electron transport accessory proteins | 8074498 | 3000325 | SCOP2B (2022-06-29) |
| D | SCOP2 Family | Photosystem I subunit PsaD | 8074483 | 4003498 | SCOP2 (2022-06-29) |
| D | SCOP2 Superfamily | Photosystem I subunit PsaD | 8074484 | 3000951 | SCOP2 (2022-06-29) |
| T [auth d] | SCOP2B Superfamily | Photosystem I subunit PsaD | 8074484 | 3000951 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | 4Fe-4S ferredoxins | 8074478 | 3000020 | SCOP2B (2022-06-29) |
| S [auth c] | SCOP2B Superfamily | 4Fe-4S ferredoxins | 8074478 | 3000020 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8074470 | 3000850 | SCOP2B (2022-06-29) |
| R [auth b] | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8074470 | 3000850 | SCOP2B (2022-06-29) |
| FA [auth 9] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8077000 | 3000343 | SCOP2B (2022-06-29) |
| P [auth 4] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8077000 | 3000343 | SCOP2B (2022-06-29) |
| EA [auth 8] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8076994 | 3000343 | SCOP2B (2022-06-29) |
| O [auth 3] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8076994 | 3000343 | SCOP2B (2022-06-29) |
| DA [auth 7] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8076998 | 3000343 | SCOP2B (2022-06-29) |
| N [auth 2] | SCOP2 Family | Chlorophyll a-b binding protein | 8076997 | 4001763 | SCOP2 (2022-06-29) |
| N [auth 2] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8076998 | 3000343 | SCOP2 (2022-06-29) |
| CA [auth 6] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8076986 | 3000343 | SCOP2B (2022-06-29) |
| M [auth 1] | SCOP2 Family | Chlorophyll a-b binding protein | 8076985 | 4001763 | SCOP2 (2022-06-29) |
| M [auth 1] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8076986 | 3000343 | SCOP2 (2022-06-29) |
| BA [auth l] | SCOP2B Superfamily | Photosystem I reaction center subunit XI, PsaL | 8087174 | 3000870 | SCOP2B (2022-06-29) |
| L | SCOP2 Family | Photosystem I reaction center subunit XI, PsaL | 8087173 | 4002135 | SCOP2 (2022-06-29) |
| L | SCOP2 Superfamily | Photosystem I reaction center subunit XI, PsaL | 8087174 | 3000870 | SCOP2 (2022-06-29) |
| J | SCOP2B Superfamily | Subunit IX of photosystem I reaction centre, PsaJ | 8097086 | 3000824 | SCOP2B (2022-06-29) |
| Z [auth j] | SCOP2 Family | Subunit IX of photosystem I reaction centre, PsaJ | 8097085 | 4002101 | SCOP2 (2022-06-29) |
| Z [auth j] | SCOP2 Superfamily | Subunit IX of photosystem I reaction centre, PsaJ | 8097086 | 3000824 | SCOP2 (2022-06-29) |
| A | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8074458 | 3000850 | SCOP2B (2022-06-29) |
| Q [auth a] | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8074458 | 3000850 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I | e4xk8I1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| Y [auth i] | e4xk8i1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| H | e4xk8H1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| X [auth h] | e4xk8h1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| G | e4xk8G1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| W [auth g] | e4xk8g1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| F | e4xk8F1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| V [auth f] | e4xk8f1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| E | e4xk8E1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| U [auth e] | e4xk8e1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| D | e4xk8D1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| T [auth d] | e4xk8d1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| C | e4xk8C1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| S [auth c] | e4xk8c1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| B | e4xk8B1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| R [auth b] | e4xk8b1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| FA [auth 9] | e4xk891 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| P [auth 4] | e4xk841 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| EA [auth 8] | e4xk881 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| O [auth 3] | e4xk831 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| DA [auth 7] | e4xk871 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| N [auth 2] | e4xk821 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| CA [auth 6] | e4xk861 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| M [auth 1] | e4xk811 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| BA [auth l] | e4xk8l1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| L | e4xk8L1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| AA [auth k] | e4xk8k1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| K | e4xk8K1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| J | e4xk8J1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| Z [auth j] | e4xk8j1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| A | e4xk8A1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) | |
| Q [auth a] | e4xk8a1 | A: TBP-like | X: Bet v1-like | H: Bet v1-like | T: MAPEG | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| G, W [auth g] | PF01241 | Photosystem I psaG / psaK (PSI_PSAK) | Photosystem I psaG / psaK | - | Family |
| F, V [auth f] | PF02507 | Photosystem I reaction centre subunit III (PSI_PsaF) | Photosystem I reaction centre subunit III | - | Family |
| D, T [auth d] | PF02531 | PsaD (PsaD) | PsaD | - | Family |
| DA [auth 7], N [auth 2] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| CA [auth 6], M [auth 1] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Photosystems | Photosystem I |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Photosystems | Photosystem I (plant) |














