The structure of plant photosystem I super-complex at 2.8 angstrom resolution.
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| M [auth 2] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8076998 | 3000343 | SCOP2B (2022-06-29) |
| I [auth D] | SCOP2B Superfamily | Photosystem I subunit PsaD | 8074482 | 3000951 | SCOP2B (2022-06-29) |
| H [auth C] | SCOP2B Superfamily | 4Fe-4S ferredoxins | 8074478 | 3000020 | SCOP2B (2022-06-29) |
| G [auth L] | SCOP2B Superfamily | Photosystem I reaction center subunit XI, PsaL | 8087174 | 3000870 | SCOP2B (2022-06-29) |
| E [auth F] | SCOP2B Superfamily | Subunit III of photosystem I reaction centre, PsaF | 8074442 | 3000813 | SCOP2B (2022-06-29) |
| D [auth J] | SCOP2B Superfamily | Subunit IX of photosystem I reaction centre, PsaJ | 8074522 | 3000824 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8074470 | 3000850 | SCOP2B (2022-06-29) |
| P [auth 3] | SCOP2 Family | Chlorophyll a-b binding protein | 8076993 | 4001763 | SCOP2 (2022-06-29) |
| P [auth 3] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8076994 | 3000343 | SCOP2 (2022-06-29) |
| N [auth 4] | SCOP2 Family | Chlorophyll a-b binding protein | 8076999 | 4001763 | SCOP2 (2022-06-29) |
| N [auth 4] | SCOP2 Superfamily | Chlorophyll a-b binding protein | 8077000 | 3000343 | SCOP2 (2022-06-29) |
| K [auth H] | SCOP2 Family | Photosystem I reaction centre subunit VI | 8051253 | 4007266 | SCOP2 (2022-06-29) |
| K [auth H] | SCOP2 Superfamily | Photosystem I reaction centre subunit VI | 8102525 | 3002733 | SCOP2 (2022-06-29) |
| J [auth E] | SCOP2B Superfamily | Electron transport accessory proteins | 8074498 | 3000325 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Photosystem I subunits PsaA/PsaB | 8074457 | 4002118 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Photosystem I subunits PsaA/PsaB | 8074458 | 3000850 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| M [auth 2] | e4y2821 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| I [auth D] | e4y28D1 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| H [auth C] | e4y28C1 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| G [auth L] | e4y28L1 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| F [auth G] | e4y28G1 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| E [auth F] | e4y28F1 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| D [auth J] | e4y28J1 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| C [auth I] | e4y28I1 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| B | e4y28B1 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| P [auth 3] | e4y2831 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| O [auth 1] | e4y2811 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| N [auth 4] | e4y2841 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| L [auth K] | e4y28K1 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| K [auth H] | e4y28H1 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| J [auth E] | e4y28E1 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) | |
| A | e4y28A1 | A: Sigma2 domain-like | X: Bacterial enterotoxins | H: Bacterial enterotoxins | T: SSL_OB | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| I [auth D] | 3.30.1470.10 | Alpha Beta | 2-Layer Sandwich | Photosystem 1 Reaction Centre Subunit Ii | Chain: D | CATH (4.3.0) |
| H [auth C] | 3.30.70.20 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
| G [auth L] | 1.20.1240.10 | Mainly Alpha | Up-down Bundle | Photosystem 1 Reaction Centre Subunit Xi | Chain: L | CATH (4.3.0) |
| E [auth F] | 1.10.8.110 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
| D [auth J] | 1.20.5.510 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Single helix bin | CATH (4.3.0) |
| B | 1.20.1130.10 | Mainly Alpha | Up-down Bundle | Photosystem I p700 chlorophyll A apoprotein A1 | Photosystem I PsaA/PsaB | CATH (4.3.0) |
| J [auth E] | 2.30.30.50 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
| A | 1.20.1130.10 | Mainly Alpha | Up-down Bundle | Photosystem I p700 chlorophyll A apoprotein A1 | Photosystem I PsaA/PsaB | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| M [auth 2] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |














