4Y9L | pdb_00004y9l

Crystal Structure of Caenorhabditis elegans ACDH-11


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALactamase_B_2e4y9lA2 A: alpha bundlesX: Cytidine deaminase-likeH: Cytidine deaminase-likeT: Cytidine deaminase-likeF: Lactamase_B_2ECOD (develop294)
Ae4y9lA1 A: alpha bundlesX: SMI1/KNR4-likeH: SMI1/KNR4-likeT: SMI1/KNR4-likeF:ECOD (develop294)
BPhyHe4y9lB1 A: alpha bundlesX: ssDNA-binding transcriptional regulator domain-likeH: ssDNA-binding transcriptional regulator domainT: ssDNA-binding transcriptional regulator domainF: PhyHECOD (develop294)
BCDO_Ie4y9lB3 A: alpha bundlesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: CDO_IECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF18158Adaptive response protein AidB N-terminal domain (AidB_N)Adaptive response protein AidB N-terminal domainThis is the N-terminal domain of Adaptive response protein AidB present in E. coli. AidB is upregulated in response to small doses of DNA-methylating agents initiates a response that mitigates the mutagenic and cytotoxic effects of DNA methylation. T ...This is the N-terminal domain of Adaptive response protein AidB present in E. coli. AidB is upregulated in response to small doses of DNA-methylating agents initiates a response that mitigates the mutagenic and cytotoxic effects of DNA methylation. Tetramer formation is thought to be carried out by the N-terminal domain [1].
Domain
A, B
PF02770Acyl-CoA dehydrogenase, middle domain (Acyl-CoA_dh_M)Acyl-CoA dehydrogenase, middle domainCentral domain of Acyl-CoA dehydrogenase has a beta-barrel fold. Domain
A, B
PF00441Acyl-CoA dehydrogenase, C-terminal domain (Acyl-CoA_dh_1)Acyl-CoA dehydrogenase, C-terminal domainC-terminal domain of Acyl-CoA dehydrogenase is an all-alpha, four helical up-and-down bundle. Domain
A, B
PF22217Acyl-CoA dehydrogenase 11 C-terminal domain-like (ACDH-11_C)Acyl-CoA dehydrogenase 11 C-terminal domain-likeAcyl-CoA dehydrogenase 11 (ACDH-11) sequesters C11/C12-chain fatty acids and prevents these fatty acids from activating nuclear hormone receptors and driving fat-7 expression. This enzyme consists of four domains, of which the C-terminal, represented ...Acyl-CoA dehydrogenase 11 (ACDH-11) sequesters C11/C12-chain fatty acids and prevents these fatty acids from activating nuclear hormone receptors and driving fat-7 expression. This enzyme consists of four domains, of which the C-terminal, represented by this entry, folds into a four-helical up-and-down bundle [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Protein ACDH-11, isoform b -