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 4YZA | pdb_00004yza

C. bescii Family 3 pectate lyase double mutant K108A/Q111A in complex with trigalacturonic acid

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyPectin lyase-like 8089108 3001746 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPectin lyase-like 8089108 3001746 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPI3_PI4_kinasee4yzaB1 A: alpha arraysX: Restriction endonuclease-likeH: HTHT: winged helix domainF: PI3_PI4_kinaseECOD (v295.2)
API3_PI4_kinasee4yzaA1 A: alpha arraysX: Restriction endonuclease-likeH: HTHT: winged helix domainF: PI3_PI4_kinaseECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-likeCATH (4.3.0)
A2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-likeCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Pectate lyase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR0104963-keto-alpha-glucoside-1,2-lyase/3-keto-2-hydroxy-glucal hydratase domainDomain
A, B
IPR013320Concanavalin A-like lectin/glucanase domain superfamilyHomologous Superfamily
A, B
IPR012334Pectin lyase foldHomologous Superfamily
A, B
IPR004898Pectate lyase PlyH/PlyE-likeFamily
A, B
IPR011050Pectin lyase fold/virulence factorHomologous Superfamily