4ZGZ | pdb_00004zgz

STRUCTURE OF HUMAN ANTIZYME INHIBITOR IN COMPLEX WITH A C-TERMINAL FRAGMENT OF ANTIZYME

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	AZ1 domain-like	8082005	3002482	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	AZ1 domain-like	8082005	3002482	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C		e4zgzC1	A: jelly-roll	X: Double-stranded beta-helix	H: Double-stranded beta-helix	T: Ribosomal_L24e	F:	ECOD (20:10:01)
A		e4zgzA1	A: jelly-roll	X: Double-stranded beta-helix	H: Double-stranded beta-helix	T: Ribosomal_L24e	F:	ECOD (20:10:01)
D		e4zgzD1	A: jelly-roll	X: Double-stranded beta-helix	H: Double-stranded beta-helix	T: Ribosomal_L24e	F:	ECOD (20:10:01)
B		e4zgzB1	A: jelly-roll	X: Double-stranded beta-helix	H: Double-stranded beta-helix	T: Ribosomal_L24e	F:	ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain (Orn_Arg_deC_N)	Pyridoxal-dependent decarboxylase, pyridoxal binding domain	These pyridoxal-dependent decarboxylases acting on ornithine, lysine, arginine and related substrates This domain has a TIM barrel fold.	Domain
A, C	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain (Orn_DAP_Arg_deC)	Pyridoxal-dependent decarboxylase, C-terminal sheet domain	These pyridoxal-dependent decarboxylases act on ornithine, lysine, arginine and related substrates.	Domain
B, D	PF02100	Ornithine decarboxylase antizyme (ODC_AZ)	Ornithine decarboxylase antizyme	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C	Antizyme inhibitor 1	ornithine decarboxylase activator activity enzyme regulator activity enzyme activator activity ornithine decarboxylase regulator activity molecular function activator activity molecular function regulator activity ornithine decarboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity	oxoacid metabolic process amino acid metabolic process organic acid metabolic process alpha-amino acid metabolic process arginine metabolic process biogenic amine biosynthetic process putrescine metabolic process small molecule metabolic process putrescine biosynthetic process from arginine, via ornithine carboxylic acid metabolic process primary metabolic process polyamine metabolic process L-amino acid metabolic process putrescine biosynthetic process oxoacid metabolic process amino acid metabolic process organic acid metabolic process alpha-amino acid metabolic process arginine metabolic process biogenic amine biosynthetic process putrescine metabolic process small molecule metabolic process putrescine biosynthetic process from arginine, via ornithine carboxylic acid metabolic process primary metabolic process polyamine metabolic process L-amino acid metabolic process putrescine biosynthetic process amine metabolic process proteinogenic amino acid metabolic process biosynthetic process amine biosynthetic process polyamine biosynthetic process putrescine biosynthetic process from arginine metabolic process cellular process biogenic amine metabolic process catabolic process regulation of cellular process negative regulation of biological process macromolecule catabolic process negative regulation of protein catabolic process regulation of primary metabolic process negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process negative regulation of catabolic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation protein catabolic process regulation of macromolecule metabolic process regulation of catabolic process macromolecule metabolic process regulation of metabolic process regulation of protein catabolic process regulation of localization regulation of polyamine transmembrane transport nitrogen compound transport transport regulation of transport positive regulation of biological process establishment of localization transmembrane transport polyamine transmembrane transport localization regulation of transmembrane transport positive regulation of transport positive regulation of transmembrane transport polyamine transport positive regulation of cellular process positive regulation of polyamine transmembrane transport	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
B, D	Ornithine decarboxylase antizyme 1	enzyme regulator activity molecular function inhibitor activity ornithine decarboxylase regulator activity molecular function regulator activity enzyme inhibitor activity ornithine decarboxylase inhibitor activity	amine metabolic process biogenic amine biosynthetic process biosynthetic process amine biosynthetic process polyamine biosynthetic process metabolic process cellular process polyamine metabolic process biogenic amine metabolic process viral gene expression viral process viral translational frameshifting viral translation regulation of localization amine metabolic process biogenic amine biosynthetic process biosynthetic process amine biosynthetic process polyamine biosynthetic process metabolic process cellular process polyamine metabolic process biogenic amine metabolic process viral gene expression viral process viral translational frameshifting viral translation regulation of localization regulation of polyamine transmembrane transport regulation of biological process nitrogen compound transport regulation of cellular process negative regulation of polyamine transmembrane transport transport regulation of transport biological regulation negative regulation of biological process negative regulation of transport establishment of localization negative regulation of transmembrane transport transmembrane transport polyamine transmembrane transport localization regulation of transmembrane transport negative regulation of cellular process polyamine transport catabolic process positive regulation of protein metabolic process positive regulation of biological process macromolecule catabolic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of macromolecule metabolic process protein metabolic process positive regulation of cellular process regulation of protein metabolic process primary metabolic process regulation of macromolecule metabolic process protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of catabolic process macromolecule metabolic process regulation of metabolic process regulation of protein catabolic process establishment of protein localization cellular localization regulation of protein localization positive regulation of establishment of protein localization positive regulation of protein transport establishment of localization in cell positive regulation of intracellular transport intracellular protein localization regulation of intracellular transport regulation of establishment of protein localization intracellular transport regulation of protein transport positive regulation of transport protein transport regulation of cellular localization macromolecule localization positive regulation of protein localization regulation of intracellular protein transport positive regulation of intracellular protein transport intracellular protein transport	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C	IPR002433	Ornithine decarboxylase	Family
A, C	IPR029066	PLP-binding barrel	Homologous Superfamily
A, C	IPR022644	Orn/DAP/Arg decarboxylase 2, N-terminal	Domain
A, C	IPR009006	Alanine racemase/group IV decarboxylase, C-terminal	Homologous Superfamily
A, C	IPR031178	Antizyme inhibitor 1	Family
A, C	IPR000183	Ornithine/DAP/Arg decarboxylase	Family
A, C	IPR022657	Orn/DAP/Arg decarboxylase 2, conserved site	Conserved Site
B, D	IPR038581	Ornithine decarboxylase antizyme superfamily	Homologous Superfamily
B, D	IPR002993	Ornithine decarboxylase antizyme	Family
B, D	IPR016181	Acyl-CoA N-acyltransferase	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, C	Pharos: O14977	adenoma dermatomyositis invasive ductal breast carcinoma lymphoplasmacytic lymphoma osteosarcoma B-cell chronic lymphocytic leukemia hereditary spastic paraplegia lung adenocarcinoma malignant ependymoma ovarian cancer breast cancer IgA glomerulonephritis lung cancer myopathy plasma cell myeloma
B, D	Pharos: P54368	atypical teratoid rhabdoid tumor lymphoplasmacytic lymphoma plasma cell myeloma diabetes mellitus ovarian cancer lung cancer pancreatic intraductal papillary-mucinous neoplasm

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.