5BV2
Crystal structure of E. coli HPII catalase variant
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D [auth S] | SCOP2B Superfamily | Heme-dependent catalase-like | 8038396 | 3001681 | SCOP2B (2022-06-29) |
D [auth S] | SCOP2B Superfamily | Class I glutamine amidotransferase-like | 8038393 | 3001405 | SCOP2B (2022-06-29) |
A [auth P] | SCOP2B Superfamily | Class I glutamine amidotransferase-like | 8038393 | 3001405 | SCOP2B (2022-06-29) |
A [auth P] | SCOP2B Superfamily | Heme-dependent catalase-like | 8038396 | 3001681 | SCOP2B (2022-06-29) |
B [auth Q] | SCOP2B Superfamily | Heme-dependent catalase-like | 8038396 | 3001681 | SCOP2B (2022-06-29) |
B [auth Q] | SCOP2B Superfamily | Class I glutamine amidotransferase-like | 8038393 | 3001405 | SCOP2B (2022-06-29) |
C [auth R] | SCOP2B Superfamily | Class I glutamine amidotransferase-like | 8038393 | 3001405 | SCOP2B (2022-06-29) |
C [auth R] | SCOP2B Superfamily | Heme-dependent catalase-like | 8038396 | 3001681 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D [auth S] | Catalase | e5bv2S2 | A: beta barrels | X: Barrel domain in heme-dependent catalases (From Topology) | H: Barrel domain in heme-dependent catalases (From Topology) | T: Barrel domain in heme-dependent catalases | F: Catalase | ECOD (1.6) |
D [auth S] | Catalase_1 | e5bv2S1 | A: alpha bundles | X: First alpha-helical domain in heme-dependent catalases (From Topology) | H: First alpha-helical domain in heme-dependent catalases (From Topology) | T: First alpha-helical domain in heme-dependent catalases | F: Catalase_1 | ECOD (1.6) |
D [auth S] | Catalase-rel | e5bv2S3 | A: alpha bundles | X: Second alpha-helical domain in heme-dependent catalases (From Topology) | H: Second alpha-helical domain in heme-dependent catalases (From Topology) | T: Second alpha-helical domain in heme-dependent catalases | F: Catalase-rel | ECOD (1.6) |
D [auth S] | GATase1_catalase | e5bv2S4 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: GATase1_catalase | ECOD (1.6) |
A [auth P] | Catalase | e5bv2P3 | A: beta barrels | X: Barrel domain in heme-dependent catalases (From Topology) | H: Barrel domain in heme-dependent catalases (From Topology) | T: Barrel domain in heme-dependent catalases | F: Catalase | ECOD (1.6) |
A [auth P] | Catalase_1 | e5bv2P2 | A: alpha bundles | X: First alpha-helical domain in heme-dependent catalases (From Topology) | H: First alpha-helical domain in heme-dependent catalases (From Topology) | T: First alpha-helical domain in heme-dependent catalases | F: Catalase_1 | ECOD (1.6) |
A [auth P] | Catalase-rel | e5bv2P4 | A: alpha bundles | X: Second alpha-helical domain in heme-dependent catalases (From Topology) | H: Second alpha-helical domain in heme-dependent catalases (From Topology) | T: Second alpha-helical domain in heme-dependent catalases | F: Catalase-rel | ECOD (1.6) |
A [auth P] | GATase1_catalase | e5bv2P1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: GATase1_catalase | ECOD (1.6) |
B [auth Q] | Catalase | e5bv2Q2 | A: beta barrels | X: Barrel domain in heme-dependent catalases (From Topology) | H: Barrel domain in heme-dependent catalases (From Topology) | T: Barrel domain in heme-dependent catalases | F: Catalase | ECOD (1.6) |
B [auth Q] | Catalase_1 | e5bv2Q4 | A: alpha bundles | X: First alpha-helical domain in heme-dependent catalases (From Topology) | H: First alpha-helical domain in heme-dependent catalases (From Topology) | T: First alpha-helical domain in heme-dependent catalases | F: Catalase_1 | ECOD (1.6) |
B [auth Q] | Catalase-rel | e5bv2Q1 | A: alpha bundles | X: Second alpha-helical domain in heme-dependent catalases (From Topology) | H: Second alpha-helical domain in heme-dependent catalases (From Topology) | T: Second alpha-helical domain in heme-dependent catalases | F: Catalase-rel | ECOD (1.6) |
B [auth Q] | GATase1_catalase | e5bv2Q3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: GATase1_catalase | ECOD (1.6) |
C [auth R] | Catalase | e5bv2R4 | A: beta barrels | X: Barrel domain in heme-dependent catalases (From Topology) | H: Barrel domain in heme-dependent catalases (From Topology) | T: Barrel domain in heme-dependent catalases | F: Catalase | ECOD (1.6) |
C [auth R] | Catalase_1 | e5bv2R1 | A: alpha bundles | X: First alpha-helical domain in heme-dependent catalases (From Topology) | H: First alpha-helical domain in heme-dependent catalases (From Topology) | T: First alpha-helical domain in heme-dependent catalases | F: Catalase_1 | ECOD (1.6) |
C [auth R] | Catalase-rel | e5bv2R2 | A: alpha bundles | X: Second alpha-helical domain in heme-dependent catalases (From Topology) | H: Second alpha-helical domain in heme-dependent catalases (From Topology) | T: Second alpha-helical domain in heme-dependent catalases | F: Catalase-rel | ECOD (1.6) |
C [auth R] | GATase1_catalase | e5bv2R3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: GATase1_catalase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth P], B [auth Q], C [auth R], D [auth S] | PF18011 | C-terminal domain found in long catalases (Catalase_C) | C-terminal domain found in long catalases | This domain is found at the C-terminus of a variety of large catalase enzymes from bacteria. Structurally it is related to class I glutamine amidotransferase domains. The precise molecular function of this domain is uncertain. | Domain |
A [auth P], B [auth Q], C [auth R], D [auth S] | PF06628 | Catalase-related immune-responsive (Catalase-rel) | Catalase-related immune-responsive | - | Family |
A [auth P], B [auth Q], C [auth R], D [auth S] | PF00199 | Catalase (Catalase) | Catalase | - | Domain |