5BWD
Benzylsuccinate alpha-gamma bound to fumarate
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PFL-like | e5bwdA1 | A: a/b barrels | X: Ten stranded beta/alpha barrel (From Topology) | H: Ten stranded beta/alpha barrel (From Topology) | T: Ten stranded beta/alpha barrel | F: PFL-like | ECOD (1.6) |
A | PFL-like | e5bwdA2 | A: extended segments | X: Glycyl radical domain (From Topology) | H: Glycyl radical domain (From Topology) | T: Glycyl radical domain | F: PFL-like | ECOD (1.6) |
B [auth C] | BssC_TutF | e5bwdC1 | A: few secondary structure elements | X: HIPIP (high potential iron protein) (From Topology) | H: HIPIP (high potential iron protein) (From Topology) | T: HIPIP (high potential iron protein) | F: BssC_TutF | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01228 | Glycine radical (Gly_radical) | Glycine radical | Domain | ||
PF02901 | Pyruvate formate lyase-like (PFL-like) | Pyruvate formate lyase-like | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
benzylsuccinate synthase alpha chain | - | |||
B [auth C] | benzylsuccinate synthase gamma chain | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR051215 | Glycyl Radical Enzyme | Family | |
IPR004184 | Pyruvate formate lyase domain | Domain | |
IPR001150 | Glycine radical domain | Domain | |
IPR019777 | Formate C-acetyltransferase glycine radical, conserved site | Conserved Site | |
B [auth C] | IPR013161 | Benzylsuccinate synthase gamma subunit | Family |
B [auth C] | IPR038640 | Benzylsuccinate synthase gamma subunit superfamily | Homologous Superfamily |