5CBO | pdb_00005cbo

Fusion protein of mbp3-16 and B4 domain of protein A from staphylococcal aureus

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Immunoglobulin-binding protein A modules	8091647	4000790	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Bacterial immunoglobulin/albumin-binding domains	8091649	3001373	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Bacterial immunoglobulin/albumin-binding domains	8091649	3001373	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Bacterial immunoglobulin/albumin-binding domains	8091649	3001373	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Bacterial immunoglobulin/albumin-binding domains	8091649	3001373	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Bacterial immunoglobulin/albumin-binding domains	8091649	3001373	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Bacterial immunoglobulin/albumin-binding domains	8091649	3001373	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Bacterial immunoglobulin/albumin-binding domains	8091649	3001373	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Bacterial immunoglobulin/albumin-binding domains	8091649	3001373	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Bacterial immunoglobulin/albumin-binding domains	8091649	3001373	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Bacterial immunoglobulin/albumin-binding domains	8091649	3001373	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Bacterial immunoglobulin/albumin-binding domains	8091649	3001373	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Bacterial immunoglobulin/albumin-binding domains	8091649	3001373	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	B	e5cboA1	A: alpha bundles	X: HTH	H: HUP domains	T: HUP domains	F: B	ECOD (develop294)
B	B	e5cboB1	A: alpha bundles	X: HTH	H: HUP domains	T: HUP domains	F: B	ECOD (develop294)
C	B	e5cboC1	A: alpha bundles	X: HTH	H: HUP domains	T: HUP domains	F: B	ECOD (develop294)
D	B	e5cboD1	A: alpha bundles	X: HTH	H: HUP domains	T: HUP domains	F: B	ECOD (develop294)
E	B	e5cboE1	A: alpha bundles	X: HTH	H: HUP domains	T: HUP domains	F: B	ECOD (develop294)
F	B	e5cboF1	A: alpha bundles	X: HTH	H: HUP domains	T: HUP domains	F: B	ECOD (develop294)
G	B	e5cboG1	A: alpha bundles	X: HTH	H: HUP domains	T: HUP domains	F: B	ECOD (develop294)
H	B	e5cboH1	A: alpha bundles	X: HTH	H: HUP domains	T: HUP domains	F: B	ECOD (develop294)
I	B	e5cboI1	A: alpha bundles	X: HTH	H: HUP domains	T: HUP domains	F: B	ECOD (develop294)
J	B	e5cboJ1	A: alpha bundles	X: HTH	H: HUP domains	T: HUP domains	F: B	ECOD (develop294)
K	B	e5cboK1	A: alpha bundles	X: HTH	H: HUP domains	T: HUP domains	F: B	ECOD (develop294)
L	B	e5cboL1	A: alpha bundles	X: HTH	H: HUP domains	T: HUP domains	F: B	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.25.40.20	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Ankyrin repeat-containing domain	CATH (4.3.0)
A	1.20.5.420	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Immunoglobulin FC, subunit C	CATH (4.3.0)
B	1.25.40.20	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Ankyrin repeat-containing domain	CATH (4.3.0)
B	1.20.5.420	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Immunoglobulin FC, subunit C	CATH (4.3.0)
C	1.25.40.20	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Ankyrin repeat-containing domain	CATH (4.3.0)
C	1.20.5.420	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Immunoglobulin FC, subunit C	CATH (4.3.0)
D	1.25.40.20	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Ankyrin repeat-containing domain	CATH (4.3.0)
D	1.20.5.420	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Immunoglobulin FC, subunit C	CATH (4.3.0)
E	1.25.40.20	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Ankyrin repeat-containing domain	CATH (4.3.0)
E	1.20.5.420	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Immunoglobulin FC, subunit C	CATH (4.3.0)
F	1.25.40.20	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Ankyrin repeat-containing domain	CATH (4.3.0)
F	1.20.5.420	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Immunoglobulin FC, subunit C	CATH (4.3.0)
G	1.25.40.20	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Ankyrin repeat-containing domain	CATH (4.3.0)
G	1.20.5.420	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Immunoglobulin FC, subunit C	CATH (4.3.0)
H	1.25.40.20	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Ankyrin repeat-containing domain	CATH (4.3.0)
H	1.20.5.420	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Immunoglobulin FC, subunit C	CATH (4.3.0)
I	1.25.40.20	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Ankyrin repeat-containing domain	CATH (4.3.0)
I	1.20.5.420	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Immunoglobulin FC, subunit C	CATH (4.3.0)
J	1.25.40.20	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Ankyrin repeat-containing domain	CATH (4.3.0)
J	1.20.5.420	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Immunoglobulin FC, subunit C	CATH (4.3.0)
K	1.25.40.20	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Ankyrin repeat-containing domain	CATH (4.3.0)
K	1.20.5.420	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Immunoglobulin FC, subunit C	CATH (4.3.0)
L	1.25.40.20	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Ankyrin repeat-containing domain	CATH (4.3.0)
L	1.20.5.420	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Immunoglobulin FC, subunit C	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	mbp3-16,Immunoglobulin G-binding protein A	protein-containing complex binding binding immunoglobulin binding IgG binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR009063	Immunoglobulin/albumin-binding domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR005877	YSIRK Gram-positive signal peptide	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR036779	LysM domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR005038	Octapeptide repeat	Repeat
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR003132	Protein A, Ig-binding domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR018392	LysM domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR019931	LPXTG cell wall anchor motif	Conserved Site