5FRZ
crystal structure of the phenol-responsive sensory domain of the transcription activator PoxR with 3,4-dimethylphenol
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | XylR_N | e5frzB1 | A: a+b complex topology | X: H-NOX domain (From Topology) | H: H-NOX domain (From Topology) | T: H-NOX domain | F: XylR_N | ECOD (1.6) |
A | XylR_N | e5frzA1 | A: a+b complex topology | X: H-NOX domain (From Topology) | H: H-NOX domain (From Topology) | T: H-NOX domain | F: XylR_N | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02830 | V4R domain (V4R) | V4R domain | - | Family | |
PF06505 | Activator of aromatic catabolism (XylR_N) | Activator of aromatic catabolism | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR010523 | Activator of aromatic catabolism | Domain | |
IPR002197 | DNA binding HTH domain, Fis-type | Domain | |
IPR024096 | NO signalling/Golgi transport ligand-binding domain superfamily | Homologous Superfamily | |
IPR002078 | RNA polymerase sigma factor 54 interaction domain | Domain | |
IPR025662 | Sigma-54 interaction domain, ATP-binding site 1 | Binding Site | |
IPR025944 | Sigma-54 interaction domain, conserved site | Conserved Site | |
IPR004096 | 4-vinyl reductase, 4VR | Domain | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR025943 | Sigma-54 interaction domain, ATP-binding site 2 | Binding Site | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |